Evidence map›Paper›PMID 39650564›Full record

ArticleProteoglycan research

High-fidelity and iterative affinity extraction of hyaluronan.

Dorothea A Erxleben, Felipe Rivas, Ian Smith, Suruchi Poddar, Paul L DeAngelis, Elaheh Rahbar, Adam R Hall

Abstract read
In one paragraph

Article in Proteoglycan research. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Dorothea A ErxlebenVirginia Tech-Wake Forest University School of Biomedical Engineering and Sciences, Wake Forest University School of Medicine Winston-Salem North Carolina USA.
Felipe RivasVirginia Tech-Wake Forest University School of Biomedical Engineering and Sciences, Wake Forest University School of Medicine Winston-Salem North Carolina USA.
Ian SmithDepartment of Biology Wake Forest University Winston-Salem North Carolina USA.
Suruchi PoddarVirginia Tech-Wake Forest University School of Biomedical Engineering and Sciences, Wake Forest University School of Medicine Winston-Salem North Carolina USA.
Paul L DeAngelisDepartment of Biochemistry and Physiology University of Oklahoma Health Sciences Center Oklahoma City Oklahoma USA.
Elaheh RahbarDepartments of Biomedical Engineering and Veterinary Physiology and Pharmacology Texas A&M University College Station Texas USA.
Adam R HallVirginia Tech-Wake Forest University School of Biomedical Engineering and Sciences, Wake Forest University School of Medicine Winston-Salem North Carolina USA.

Funding

Using Integrated Omics to Identify Dysfunctional Genetic Mechanisms Influencing Schizophrenia and Sleep DisturbancesP20GM130423 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Diane E Mahoney · 2019 to 2026
$21.5M
Single-Molecule Processing: Detection and Identification of Single DNAs, RNAs, and Proteins using Immobilized Nanoscale Enzymatic Reactors (INERs) and Nanoscale ElectrophoresisP41EB020594 · NIBIB · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Steven Allan Soper · 2015 to 2026
$15.2M
Solid-state nanopores for translational analysis of hyaluronan abundance and size distributionR01GM134226 · NIGMS · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI Adam Roger Hall · 2020 to 2026
$2.3M
NIBIB NIH HHS P41 EB020594NIGMS NIH HHS P20 GM130423NIGMS NIH HHS R01 GM134226
6 · The paper itself

Abstract

The glycosaminoglycan hyaluronan (HA) serves a variety of crucial physiological functions in vertebrates. Synthesized at the plasma membrane and secreted into the extracellular environment, HA polymers span a wide range of molecular weights (MW) that define their activity through a notable size-function relationship. Analytical technologies for determining HA MW distributions typically require selective extraction from complex biofluids or tissues. A common method for achieving this is immunoprecipitation-like pull-down using specific HA-binding proteins bound to magnetic beads. Here, we present a systematic investigation of experimental variables involved in this process, leading to an affinity extraction protocol that enables iterative bead reuse and reagent lifetime maximization, thereby enhancing the efficiency of the HA extraction process. Our methods provide a framework for general optimization of immunoprecipitation in other contexts with heterogenous analyte sizes.

Indexed as

biomarkerhyaluronanmicrofluidicsnanoporenanosensing

Identifiers

PMID39650564
PMCPMC11623434

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.