ArticlePeerJ. Computer science2024
MSR-UNet: enhancing multi-scale and long-range dependencies in medical image segmentation.
Article in PeerJ. Computer science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
Transformer-based technology has attracted widespread attention in medical image segmentation. Due to the diversity of organs, effective modelling of multi-scale information and establishing long-range dependencies between pixels are crucial for successful medical image segmentation. However, most studies rely on a fixed single-scale window for modeling, which ignores the potential impact of window size on performance. This limitation can hinder window-based models' ability to fully explore multi-scale and long-range relationships within medical images. To address this issue, we propose a multi-scale reconfiguration self-attention (MSR-SA) module that accurately models multi-scale information and long-range dependencies in medical images. The MSR-SA module first divides the attention heads into multiple groups, each assigned an ascending dilation rate. These groups are then uniformly split into several non-overlapping local windows. Using dilated sampling, we gather the same number of keys to obtain both long-range and multi-scale information. Finally, dynamic information fusion is achieved by integrating features from the sampling points at corresponding positions across different windows. Based on the MSR-SA module, we propose a multi-scale reconfiguration U-Net (MSR-UNet) framework for medical image segmentation. Experiments on the Synapse and automated cardiac diagnosis challenge (ACDC) datasets show that MSR-UNet can achieve satisfactory segmentation results. The code is available at https://github.com/davidsmithwj/MSR-UNet (DOI: 10.5281/zenodo.13969855).
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