Evidence map›Paper›PMID 39650147›Full record

ArticleOne health (Amsterdam, Netherlands)2024

Advancing West Nile virus monitoring through whole genome sequencing: Insights from a One Health genomic surveillance study in Romagna (Italy).

Martina Brandolini, Alessandra Mistral De Pascali, Irene Zaghi, Giorgio Dirani, Silvia Zannoli, Ludovica Ingletto, Antonio Lavazza, Davide Lelli, Michele Dottori, Mattia Calzolari and 8 more

Abstract read
In one paragraph

Article in One health (Amsterdam, Netherlands), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Martina BrandoliniUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Piazza della Liberazione 60, 47522 Cesena, Italy.
Alessandra Mistral De PascaliUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Piazza della Liberazione 60, 47522 Cesena, Italy.
Irene ZaghiUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Piazza della Liberazione 60, 47522 Cesena, Italy.
Giorgio DiraniUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Piazza della Liberazione 60, 47522 Cesena, Italy.
Silvia ZannoliUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Piazza della Liberazione 60, 47522 Cesena, Italy.
Ludovica InglettoDepartment of Medical and Surgical Sciences (DIMEC), University of Bologna, Via Giuseppe Massarenti 9, 40138 Bologna, Italy.
Antonio LavazzaIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia-Romagna "Bruno Ubertini" (IZSLER), Via Antonio Bianchi 7/9, 25124 Brescia, Italy.
Davide LelliIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia-Romagna "Bruno Ubertini" (IZSLER), Via Antonio Bianchi 7/9, 25124 Brescia, Italy.
Michele DottoriIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia-Romagna "Bruno Ubertini" (IZSLER), Via Antonio Bianchi 7/9, 25124 Brescia, Italy.
Mattia CalzolariIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia-Romagna "Bruno Ubertini" (IZSLER), Via Antonio Bianchi 7/9, 25124 Brescia, Italy.
Massimiliano GuerraUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Piazza della Liberazione 60, 47522 Cesena, Italy.
Carlo BiagettiUnit of Infectious Diseases, Infermi Hospital, Viale Luigi Settembrini 2, 47923 Rimini, Italy.
Francesco CristiniUnit of Infectious Diseases, Morgagni-Pierantoni Hospital, Via Carlo Forlanini 34, 47121 Forlì, Italy.
Paolo BassiUnit of Infectious Diseases, Santa Maria delle Croci Hospital, Viale Vincenzo Randi 5, 48121 Ravenna, Italy.
Rino BiguzziUnit of Transfusion Medicine, The Greater Romagna Area Hub Laboratory, Piazza della Liberazione 60, 47522 Cesena, Italy.
Monica CriccaUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Piazza della Liberazione 60, 47522 Cesena, Italy.
Alessandra ScagliariniDepartment of Medical and Surgical Sciences (DIMEC), University of Bologna, Via Giuseppe Massarenti 9, 40138 Bologna, Italy.
Vittorio SambriUnit of Microbiology, The Greater Romagna Area Hub Laboratory, Piazza della Liberazione 60, 47522 Cesena, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the last 6 years, Italy accounted for 36 % of the total autochthonous European West Nile virus (WNV) cases reported to ECDC. Since 2001, the country put in place a multi-species national surveillance plan. The plan was enhanced in 2020 by adopting a fully integrated "One Health" approach, including human, wild bird, equine, and mosquito surveillance for the early detection of WNV. In this context, the systematic acquisition of whole viral genetic information from human patients and animals is fundamental to obtain an in-depth knowledge on the patterns of virus evolution and transmission and to gain insights on the role virus genetics in morbidity and mortality, The purpose of this pilot study was thus to design a One-Health surveillance framework based on the genomic surveillance of WNV circulating at the vector-human-animal interface, in the endemic territory of Romagna (North-Eastern Italy) during the 2023 transmission season. Whole genome sequencing (WGS) analyses confirmed the circulation of WNV lineage 2 showing high nucleotide and amino acid identity of 99.82 % and 99.92 % respectively among viral sequences from human patients, vectors and birds. All the sequences clustered with other Italian strains in the Central and Southern European clade with robust bootstrap support and BLASTn identity exceeding 99.7 %. The highest nucleotide identity was observed with sequences from Emilia-Romagna and Veneto regions (Italy), confirming a local virus circulation and overwintering of WNV lineage 2 with a confined virus spread and no (or limited) external introduction of viral strains. Our results, support the adoption of a One Health approach to WNV surveillance, based on WGS and integrating the clinical diagnosis, epidemiology, and genomic characterisation, to create a suitable operational process for the characterisation of autochthonous and imported Arboviruses circulating in Romagna to effectively integrate the already established surveillance plan.

Indexed as

ArbovirusGenomic surveillanceOne Health approachWest Nile virusWhole genome sequencing

Identifiers

PMID39650147
PMCPMC11621796

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.