Evidence map›Paper›PMID 39640563›Full record

ArticleiScience2024

Multimodal single-cell profiling reveals neuronal vulnerability and pathological cell states in focal cortical dysplasia.

Isabella C Galvão, Manuela Lemoine, Lauana A Messias, Patrícia A O R A Araújo, Jaqueline C Geraldis, Clarissa L Yasuda, Marina K M Alvim, Enrico Ghizoni, Helder Tedeschi, Fernando Cendes and 3 more

Abstract read
In one paragraph

Article in iScience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Isabella C GalvãoDepartment of Translational Medicine, School of Medical Sciences, University of Campinas (UNICAMP), São Paulo, Brazil.
Manuela LemoineDepartment of Translational Medicine, School of Medical Sciences, University of Campinas (UNICAMP), São Paulo, Brazil.
Lauana A MessiasDepartment of Translational Medicine, School of Medical Sciences, University of Campinas (UNICAMP), São Paulo, Brazil.
Patrícia A O R A AraújoDepartment of Translational Medicine, School of Medical Sciences, University of Campinas (UNICAMP), São Paulo, Brazil.
Jaqueline C GeraldisDepartment of Translational Medicine, School of Medical Sciences, University of Campinas (UNICAMP), São Paulo, Brazil.
Clarissa L YasudaThe Brazilian Institute of Neuroscience and Neurotechnology (BRAINN), Campinas, São Paulo, Brazil.
Marina K M AlvimThe Brazilian Institute of Neuroscience and Neurotechnology (BRAINN), Campinas, São Paulo, Brazil.
Enrico GhizoniThe Brazilian Institute of Neuroscience and Neurotechnology (BRAINN), Campinas, São Paulo, Brazil.
Helder TedeschiThe Brazilian Institute of Neuroscience and Neurotechnology (BRAINN), Campinas, São Paulo, Brazil.
Fernando CendesThe Brazilian Institute of Neuroscience and Neurotechnology (BRAINN), Campinas, São Paulo, Brazil.
Fabio RogerioThe Brazilian Institute of Neuroscience and Neurotechnology (BRAINN), Campinas, São Paulo, Brazil.
Iscia Lopes-CendesDepartment of Translational Medicine, School of Medical Sciences, University of Campinas (UNICAMP), São Paulo, Brazil.
Diogo F T VeigaDepartment of Translational Medicine, School of Medical Sciences, University of Campinas (UNICAMP), São Paulo, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Focal cortical dysplasia (FCD) is a neurodevelopmental condition characterized by malformations of the cerebral cortex that often cause drug-resistant epilepsy. In this study, we performed multi-omics single-nuclei profiling to map the chromatin accessibility and transcriptome landscapes of FCD type II, generating a comprehensive multimodal single-nuclei dataset comprising 61,525 cells from 11 clinical samples of lesions and controls. Our findings revealed profound chromatin, transcriptomic, and cellular alterations affecting neuronal and glial cells in FCD lesions, including the selective loss of upper-layer excitatory neurons, significant expansion of oligodendrocytes and immature astrocytic populations, and a distinct neuronal subpopulation harboring dysmorphic neurons. Furthermore, we uncovered activated microglia subsets, particularly in FCD IIb cases. This comprehensive study unveils neuronal and glial cell states driving FCD development and epileptogenicity, enhancing our understanding of FCD and offering directions for targeted therapy development.

Indexed as

Biological sciencesDevelopmental neuroscienceNeuroscienceOmics

Identifiers

PMID39640563
PMCPMC11617397

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.