Evidence map›Paper›PMID 39640512›Full record

ArticleIEEE access : practical innovations, open solutions2024

MRI Denoising Using Pixel-Wise Threshold Selection.

Nimesh Srivastava, Gyana Ranjan Sahoo, Henning U Voss, Sumit N Niogi, Jack H Freed, Madhur Srivastava

Abstract read
In one paragraph

Article in IEEE access : practical innovations, open solutions, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nimesh SrivastavaDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-5878-0738
Gyana Ranjan SahooDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-9857-4314
Henning U VossCornell MRI Facility, College of Human Ecology, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0003-2811-2074
Sumit N NiogiCornell MRI Facility, College of Human Ecology, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-6432-0017
Jack H FreedDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0003-4288-2585
Madhur SrivastavaDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-2095-0412

Funding

National Biomedical Resource for Electron-Spin Resonance Spectroscopy (ACERT)R24GM146107 · NIGMS · CORNELL UNIVERSITY · PI BRIAN R CRANE, Jack H Freed · 2022 to 2026
$6.4M
Room Temperature Protein Conformational Dynamics at Microsecond TimescalesR35GM151218 · NIGMS · CORNELL UNIVERSITY · PI Madhur Srivastava · 2023 to 2026
$1.9M
Advancing our knowledge of viral membrane fusion and of IDP-membrane interactions by ESRR35GM148272 · NIGMS · CORNELL UNIVERSITY · PI Jack H Freed · 2023 to 2026
$1.9M
NIGMS NIH HHS R24 GM146107NIGMS NIH HHS R35 GM148272NIGMS NIH HHS R35 GM151218
6 · The paper itself

Abstract

Magnetic resonance imaging (MRI) has emerged as a promising technique for non-invasive medical imaging. The primary challenge in MRI is the trade-off between image visual quality and acquisition time. Current MRI image denoising algorithms employ global thresholding to denoise the whole image, which leads to inadequate denoising or image distortion. This study introduces a novel pixel-wise (localized) thresholding approach of singular vectors, obtained from singular value decomposition, to denoise magnetic resonance (MR) images. The pixel-wise thresholding of singular vectors is performed using separate singular values as thresholds at each pixel, which is advantageous given the spatial noise variation throughout the image. The method presented is validated on MR images of a standard phantom approved by the magnetic resonance accreditation program (MRAP). The denoised images display superior visual quality and recover minute structural information otherwise suppressed in the noisy image. The increase in peak-signal-to-noise-ratio (PSNR) and contrast-to-noise-ratio (CNR) values of ≥ 18% and ≥ 200% of the denoised images, respectively, imply efficient noise removal and visual quality enhancement. The structural similarity index (SSIM) of ≥ 0.95 for denoised images indicates that the crucial structural information is recovered through the presented method. A comparison with the standard filtering methods widely used for MRI denoising establishes the superior performance of the presented method. The presented pixel-wise denoising technique reduces the scan time by 2-3 times and has the potential to be integrated into any MRI system to obtain faster and better quality images.

Indexed as

contrast-to-noise ratiodenoisingimage denoisingMagnetic resonance imagingpeak-signal-to-noise ratiopixel-wise noise threshold selectionpixel-wise thresholdingSF-SVDsingular value decompositionstructural similarity index

Identifiers

PMID39640512
PMCPMC11619618

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.