Evidence map›Paper›PMID 39638875›Full record

ArticleNature biomedical engineering2024

In vivo affinity maturation of the CD4 domains of an HIV-1-entry inhibitor.

Andi Pan, Charles C Bailey, Tianling Ou, Jinge Xu, Tonia Aristotelous, Xin Liu, Baodan Hu, Gogce Crynen, Nickolas Skamangas, Naomi Bronkema and 7 more

Abstract read
In one paragraph

Article in Nature biomedical engineering, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Molecular therapy. Advances · 2026
    Article
  3. Review
  4. Article
  5. Review
  6. CRISPR/Cas9 for achieving postintervention HIV control.Current opinion in HIV and AIDS · 2025
    Review
  7. Article
  8. Review
  9. Review
4 · The record

Corrections and comments

  • Update of
    2024
  • Update of
    2024
5 · Who and what money

Authors and funding

17 authors.

Andi PanSkaggs Graduate School, Scripps Research, La Jolla, CA, USA.
Charles C BaileyThe Center for Integrated Solutions to Infectious Diseases, The Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Tianling OuThe Center for Integrated Solutions to Infectious Diseases, The Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-5119-2239
Jinge XuThe Center for Integrated Solutions to Infectious Diseases, The Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Tonia AristotelousCenter for the Development of Therapeutics, The Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Xin LiuThe Center for Integrated Solutions to Infectious Diseases, The Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Baodan HuThe Center for Integrated Solutions to Infectious Diseases, The Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Gogce CrynenThe Herbert Wertheim UF Scripps Institute for Biomedical Innovation and Technology, Jupiter, FL, USA.
Nickolas SkamangasDivision of Infectious Disease, Boston Children's Hospital, Boston, MA, USA.
Naomi BronkemaSkaggs Graduate School, Scripps Research, La Jolla, CA, USA.
Mai H TranDivision of Infectious Disease, Boston Children's Hospital, Boston, MA, USA.
Huihui MouDivision of Infectious Disease, Boston Children's Hospital, Boston, MA, USA.
Xia ZhangThe Scripps Research Institute, Jupiter, FL, USA.
Michael D AlpertEmmune Inc., Cambridge, MA, USA.
Yiming YinDivision of Infectious Disease, Boston Children's Hospital, Boston, MA, USA.ORCID http://orcid.org/0000-0003-0087-2784
Michael FarzanSkaggs Graduate School, Scripps Research, La Jolla, CA, USA. michael.farzan@childrens.harvard.edu.ORCID http://orcid.org/0000-0002-2990-5319
Wenhui HeThe Center for Integrated Solutions to Infectious Diseases, The Broad Institute of MIT and Harvard, Cambridge, MA, USA. hewenhui@cimrbj.ac.cn.

Funding

Cell and Gene Therapy for HIV CureUM1AI126623 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI JEROME, KEITH R, KIEM, HANS-PETER · 2016 to 2020
$24.2M
Project 4: A permanent off-switch for AAVU19AI149646 · NIAID · UNIVERSITY OF FLORIDA · PI FARZAN, MICHAEL R. · 2020 to 2024
$14.0M
Therapeutic Use of an Enhanced Form of CD4-IgR37AI091476 · NIAID · UNIVERSITY OF FLORIDA · PI FARZAN, MICHAEL R. · 2016 to 2025
$9.2M
Therapeutic use of an enhanced form of CD4-IgR01AI091476 · NIAID · SCRIPPS FLORIDA · PI FARZAN, MICHAEL R. · 2011 to 2015
$4.3M
An injectable hydrogel platform for sustained release of eCD4-IgR01AI154989 · NIAID · UNIVERSITY OF FLORIDA · PI APPEL, ERIC ANDREW, FARZAN, MICHAEL R. · 2020 to 2024
$4.2M
Vectored HIV Immunotherapy via in vivo B cell editingR01AI174270 · NIAID · WASHINGTON UNIVERSITY · PI David Terry Curiel, Michael R. Farzan · 2024 to 2026
$4.0M
Engineering CAR-B cells for an HIV-1 functional cureR01DA056771 · NIDA · UNIVERSITY OF FLORIDA · PI Michael R. Farzan · 2022 to 2026
$3.5M
In vivo transformation of chimeric antigen receptor B cells for a functional cure of HIVR01AI174277 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI Hyeryun Choe, Michael R. Farzan · 2023 to 2026
$3.3M
Eliciting tyrosine-sulfated neutralizing antibodies recognizing the Env apexR21AI152836 · NIAID · SCRIPPS FLORIDA · PI FARZAN, MICHAEL R. · 2020 to 2021
$509k
NIAID NIH HHS R01 AI154989NIAID NIH HHS R01 AI174270NIAID NIH HHS R01 AI174277NIAID NIH HHS R21 AI152836NIAID NIH HHS R37 AI091476NIAID NIH HHS U19 AI149646NIAID NIH HHS UM1 AI126623NIDA NIH HHS R01 DA056771U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI091476U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI149646U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI152836U.S. Department of Health & Human Services | NIH | National Institute on Drug Abuse (NIDA) DA056771
6 · The paper itself

Abstract

Human proteins repurposed as biologics for clinical use have been engineered through in vitro techniques that improve the affinity of the biologics for their ligands. However, the techniques do not select against properties, such as protease sensitivity or self-reactivity, that impair the biologics' clinical efficacy. Here we show that the B-cell receptors of primary murine B cells can be engineered to affinity mature in vivo the human CD4 domains of the HIV-1-entry inhibitor CD4 immunoadhesin (CD4-Ig). Specifically, we introduced genes encoding the CD4 domains 1 and 2 (D1D2) of a half-life-enhanced form of CD4-Ig (CD4-Ig-v0) into the heavy-chain loci of murine B cells and adoptively transferred these cells into wild-type mice. After immunization, the B cells proliferated, class switched, affinity matured and produced D1D2-presenting antibodies. Somatic hypermutations in the D1D2-encoding region of the engrafted cells improved the binding affinity of CD4-Ig-v0 for the HIV-1 envelope glycoprotein and the inhibitor's ability to neutralize a panel of HIV-1 isolates without impairing its pharmacokinetic properties. In vivo affinity maturation of non-antibody protein biologics may guide the development of more effective therapeutics.

Indexed as

CD4 AntigensHIV-1AnimalsB-LymphocytesHumansMiceProtein DomainsVirus InternalizationCD4 Antigens

Identifiers

PMID39638875
PMCPMC12067531

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.