Evidence map›Paper›PMID 39637129›Full record

ArticlePloS one2024

Transcriptome comparison revealed the difference in subcutaneous fat metabolism of Qinghai yak under different feeding conditions.

Weiqin Ding, Yonggang Sun, Yincang Han, Yaqian Liu, Shengwei Jin

Abstract readComparative Study
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Weiqin DingAcademy of Animal Husbandry and Veterinary Sciences, Qinghai University, Xining, Qinghai, China.ORCID 0009-0001-8128-795X
Yonggang SunAcademy of Animal Husbandry and Veterinary Sciences, Qinghai University, Xining, Qinghai, China.ORCID 0009-0003-1319-4764
Yincang HanAcademy of Animal Husbandry and Veterinary Sciences, Qinghai University, Xining, Qinghai, China.
Yaqian LiuAcademy of Animal Husbandry and Veterinary Sciences, Qinghai University, Xining, Qinghai, China.
Shengwei JinAcademy of Animal Husbandry and Veterinary Sciences, Qinghai University, Xining, Qinghai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In order to explore the differences in subcutaneous fat metabolism and pathway information in yaks under different feeding conditions, this experiment used Illumina high-throughput sequencing technology to sequence the transcriptome of subcutaneous fat tissues of yaks under different feeding conditions and analyzed them bioinformatically. 9 naturally grazed yaks at 18 months of age were randomly divided into 3 groups, one group (G18_SF) was slaughtered, one group (G24_SF) continued to graze until 24 months of age was slaughtered, and one group (F24_SF) was housed until 24 months of age was slaughtered, and subcutaneous fat tissue was collected from the back of the yaks. A total of 15,261 expressed genes were identified in the nine samples, with 13,959 coexpressed genes and 533 differential expressed genes (DEGs), G18_SF vs F24_SF 133 DEGs, G18_SF vs G24_SF 469 DEGs, F24_SF vs G24_SF 5 DEGs. GO functional annotation analysis found that DEGs were mainly annotated in BP and CC, which included biological regulation, metabolic processes and cellular processes. KEGG revealed that the DEGs are mainly enriched for PPAR signaling pathway, AMPK signaling pathway and other pathways related to lipid metabolism. This study provides a scientific basis for further research on the effects of mRNA on subcutaneous fat in yaks under different feeding conditions.

Indexed as

Subcutaneous FatTranscriptomeAnimal FeedAnimalsCattleGene Expression ProfilingHigh-Throughput Nucleotide SequencingLipid Metabolism

Identifiers

PMID39637129
PMCPMC11620555

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.