Evidence map›Paper›PMID 39636920›Full record

ArticlePloS one2024

Pneumococcal nasopharyngeal carriage in children and adults self-confined at home during a COVID-19 national lockdown.

Pedro Brotons, María Cisneros, Amaresh Pérez-Argüello, Desiree Henares, Aleix Lluansí, Mariona Fernández de Sevilla, Pilar Ciruela, Miguel Blanco-Fuertes, Cristian Launes, Iolanda Jordan and 3 more

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Pedro BrotonsInstitut de Recerca Sant Joan de Déu, Hospital Sant Joan de Déu, Esplugues, Barcelona, Spain.ORCID 0000-0002-2399-7320
María CisnerosInstitut de Recerca Sant Joan de Déu, Hospital Sant Joan de Déu, Esplugues, Barcelona, Spain.ORCID 0009-0001-9715-887X
Amaresh Pérez-ArgüelloInstitut de Recerca Sant Joan de Déu, Hospital Sant Joan de Déu, Esplugues, Barcelona, Spain.
Desiree HenaresInstitut de Recerca Sant Joan de Déu, Hospital Sant Joan de Déu, Esplugues, Barcelona, Spain.
Aleix LluansíInstitut de Recerca Sant Joan de Déu, Hospital Sant Joan de Déu, Esplugues, Barcelona, Spain.
Mariona Fernández de SevillaInstitut de Recerca Sant Joan de Déu, Hospital Sant Joan de Déu, Esplugues, Barcelona, Spain.
Pilar CiruelaCIBER de Epidemiología y Salud Pública (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.
Miguel Blanco-FuertesInstitut de Recerca Sant Joan de Déu, Hospital Sant Joan de Déu, Esplugues, Barcelona, Spain.
Cristian LaunesInstitut de Recerca Sant Joan de Déu, Hospital Sant Joan de Déu, Esplugues, Barcelona, Spain.
Iolanda JordanInstitut de Recerca Sant Joan de Déu, Hospital Sant Joan de Déu, Esplugues, Barcelona, Spain.ORCID 0000-0002-2041-4425
Quique BassatCIBER de Epidemiología y Salud Pública (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.ORCID 0000-0003-0875-7596
Juan José García-GarcíaInstitut de Recerca Sant Joan de Déu, Hospital Sant Joan de Déu, Esplugues, Barcelona, Spain.ORCID 0000-0002-3483-528X
Carmen Muñoz-AlmagroInstitut de Recerca Sant Joan de Déu, Hospital Sant Joan de Déu, Esplugues, Barcelona, Spain.ORCID 0000-0001-5586-404X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDespite growing evidence of reduced invasive and non-invasive pneumococcal disease attributed to public health measures against the COVID-19 pandemic, the effect of these measures on pneumococcal carriage remains unclear. This study aimed to assess pneumococcal nasopharyngeal carriage among children and adults self-confined at home during the COVID-19 national lockdown in Spain while identifying predictors of pneumococcal carriage in children.

methodsHousehold study conducted across the metropolitan area of Barcelona (Spain) between April-June 2020. Nasopharyngeal samples were collected from young children and adults for real-time PCR pneumococcal lytA and wgz gene detection, quantification, and serotyping, as well as for detection of respiratory viruses.

resultsAmong 332 children (median age: 3.1 years [IQR: 1.9-4.0 years]; 59% male) and 278 adults (median age: 38.9 years [IQR: 36.1-41.3 years]; 64% female), pneumococcal carriage rates were 28.3% and 2.5%, respectively. Highly invasive serotypes 3, 7F/7A, and 19A were detected in 14.0% of samples from children carriers. Pneumococcal co-infections with respiratory syncytial virus (RSV), human metapneumovirus (hMPV), and influenza virus (IV) were not identified in children. Attendance to kindergarten before the lockdown (aOR: 2.65; IQR: 1.57-4.47; p<0.001) and household crowding (aOR: 1.85; IQR: 1.09-3.15; p = 0.02) were independent risk factors for children's pneumococcal carriage.

conclusionsPneumococcal carriage rate among quarantined children during a full COVID-19 lockdown was moderate and correlated with limited presence of highly invasive serotypes and absence of pneumococcal co-infections with RSV, hMPV, and IV. Pre-lockdown daycare and household crowding predisposed children to carriage.

Indexed as

Carrier StateCOVID-19NasopharynxPneumococcal InfectionsStreptococcus pneumoniaeAdultChildChild, PreschoolFemaleHumansInfantMaleSARS-CoV-2Spain

Identifiers

PMID39636920
PMCPMC11620455

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.