Evidence map›Paper›PMID 39636180›Full record

ArticleJournal of cellular and molecular medicine2024

Integrating Bulk RNA and Single-Cell RNA Sequencing Identifies and Validates Lactylation-Related Signatures for Intervertebral Disc Degeneration.

Yangyang Shi, Fudong Li, Wenbo Lin, Linhui Han, Jinyu Wang, Chen Yan, Jingchuan Sun, Chenglong Ji, Jiangang Shi, Kaiqiang Sun

Erratum issuedAbstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Yangyang ShiDepartment of Orthopedic Surgery, Changzheng Hospital, Navy Medical University, Shanghai, China.
Fudong LiDepartment of Orthopedic Surgery, Changzheng Hospital, Navy Medical University, Shanghai, China.
Wenbo LinDepartment of Orthopedic Surgery, Changzheng Hospital, Navy Medical University, Shanghai, China.
Linhui HanDepartment of Orthopedic Surgery, Changzheng Hospital, Navy Medical University, Shanghai, China.
Jinyu WangDepartment of Orthopedic Surgery, Changzheng Hospital, Navy Medical University, Shanghai, China.
Chen YanDepartment of Orthopedic Surgery, Changzheng Hospital, Navy Medical University, Shanghai, China.
Jingchuan SunDepartment of Orthopedic Surgery, Changzheng Hospital, Navy Medical University, Shanghai, China.
Chenglong JiDepartment of Orthopedic Surgery, Changzheng Hospital, Navy Medical University, Shanghai, China.
Jiangang ShiDepartment of Orthopedic Surgery, Changzheng Hospital, Navy Medical University, Shanghai, China.
Kaiqiang SunDepartment of Orthopedic Surgery, Changzheng Hospital, Navy Medical University, Shanghai, China.ORCID 0000-0002-0272-8383

Funding

National Natural Science Foundation of China 82172381National Natural Science Foundation of China 82302760National Natural Science Foundation of China 82472493Peizhi Project of Changzheng Hospital 2020YCGPZ-106Shanghai Pujiang Program 21PJD070Shanghai Shenkang Project SHDC2020CR1024B
6 · The paper itself

Abstract

Glycolysis-related lactylation has gained wide attention for regulating various cellular functions and diseases. Nevertheless, its intricate involvement in intervertebral disc degeneration (IVDD) is not yet fully understood. In this study, we unrevealed the intricate association between elevated lactylation levels and the development of IVDD. Subsequently, we harvested the lactylation-related genes (LRGs) and systematically analysed the expression levels of these genes to establish a gene signature related to IVDD through multiple bulk RNA sequencing data. Six hub LRGs were determined and closely associated with the increased severity of IVDD. Among the six genes, CBX3 was the most upregulated in both in vivo and in vitro experiments. Furthermore, molecular docking identified atosiban acetate as a specific inhibitor for CBX3, and inhibiting the expression of CBX3 using atosiban acetate significantly repressed the glycolysis activity and global lactylation level, thus alleviating the progression of IVDD. In conclusion, the lactylation correlates positively with IVDD and the LRG signature could be used as a biomarker for the effective clinical treatment of IVDD. CBX3 emerged as one of the key LRGs in IVDD, and atosiban acetate, as a specific inhibitor for CBX3, may be a promising therapeutic candidate for IVDD by affecting lactylation.

Indexed as

Intervertebral Disc DegenerationAnimalsBiomarkersGene Expression ProfilingGene Expression RegulationGlycolysisHumansMaleMolecular Docking SimulationSequence Analysis, RNASingle-Cell AnalysisTranscriptomeBiomarkersintervertebral disc degenerationlactylationmolecular mechanism

Identifiers

PMID39636180
PMCPMC11619158

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