Evidence map›Paper›PMID 39635521›Full record

ArticleFrontiers in immunology2024

Single-cell RNA sequencing reveals key molecular drivers and immune landscape in uveal melanoma: implications for targeted therapy and prognostic modeling.

Zeyu Song, Wenwen Shao, Zhikai Xiahou, Yue Xu, Xiaofeng Zhang

Abstract read
In one paragraph

Article in Frontiers in immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Zeyu Song *Department of Ophthalmology, The Fourth Affiliated Hospital of Soochow University, Suzhou, China.
Wenwen Shao *Shandong University of Traditional Chinese Medicine, Jinan, China.
Zhikai Xiahou *China Institute of Sport and Health Science, Beijing Sport University, Beijing, China.
Yue XuDepartment of Ophthalmology, The Fourth Affiliated Hospital of Soochow University, Suzhou, China.
Xiaofeng ZhangDepartment of Ophthalmology, The Fourth Affiliated Hospital of Soochow University, Suzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Uveal melanoma (UM), arising from melanocytes in the choroid, accounts for 3% to 5% of all melanocytic tumors and over 70% of intraocular malignancies. Despite effective local treatments, metastasis remains a significant challenge, with more than half of patients developing metastatic disease within ten years. Conventional therapies often yield poor outcomes, highlighting the urgent need for novel therapeutic strategies to enhance survival and prognosis for UM patients. Methods: We conducted a detailed analysis of the GSE139829 dataset, focusing on scRNA-seq data from eight primary UM patients and three with metastatic disease. Through clustering and marker gene expression analyses, we identified distinct subtypes of UM tumor cells and examined their transcriptional, metabolic, and intercellular communication profiles. We developed a novel prognostic model, PCOLCE TCs Risk Score (PTRS), centered on the C5 Results: We identified eight distinct cell types in UM and classified tumor subpopulations into six subgroups. The C5 Conclusion: This study provides insights into UM metastasis via single-cell analysis, identifying C5

Indexed as

MelanomaSingle-Cell AnalysisUveal NeoplasmsBiomarkers, TumorCell Line, TumorFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMaleMolecular Targeted TherapyPrognosisSequence Analysis, RNATumor MicroenvironmentUveal MelanomaBiomarkers, TumorCITED1immune cell infiltrationprognostic biomarkerssingle-cell RNA sequencinguveal melanoma

Identifiers

PMID39635521
PMCPMC11615085

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.