Evidence map›Paper›PMID 39635301›Full record

ArticleNanophotonics (Berlin, Germany)2024

Edge roughness analysis in nanoscale for single-molecule localization microscopy images.

Uidon Jeong, Ga-Eun Go, Dokyung Jeong, Dongmin Lee, Min Jeong Kim, Minjae Kang, Namyoon Kim, Jaehwang Jung, Wookrae Kim, Myungjun Lee and 1 more

Abstract read
In one paragraph

Article in Nanophotonics (Berlin, Germany), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Uidon JeongDepartment of Chemistry, Hanyang University, Seoul 04763, Republic of Korea.ORCID https://orcid.org/0000-0003-4799-2660
Ga-Eun GoDepartment of Chemistry, Hanyang University, Seoul 04763, Republic of Korea.
Dokyung JeongDepartment of Chemistry, Hanyang University, Seoul 04763, Republic of Korea.
Dongmin LeeDepartment of Chemistry, Hanyang University, Seoul 04763, Republic of Korea.
Min Jeong KimDepartment of Chemistry, Hanyang University, Seoul 04763, Republic of Korea.
Minjae KangDepartment of Chemistry, Hanyang University, Seoul 04763, Republic of Korea.
Namyoon KimMI Equipment R&D Team, Mechatronics Research, Samsung Electronics Co., Ltd., Hwaseong 18848, Republic of Korea.
Jaehwang JungMI Equipment R&D Team, Mechatronics Research, Samsung Electronics Co., Ltd., Hwaseong 18848, Republic of Korea.
Wookrae KimMI Equipment R&D Team, Mechatronics Research, Samsung Electronics Co., Ltd., Hwaseong 18848, Republic of Korea.
Myungjun LeeMI Equipment R&D Team, Mechatronics Research, Samsung Electronics Co., Ltd., Hwaseong 18848, Republic of Korea.
Doory KimDepartment of Chemistry, Hanyang University, Seoul 04763, Republic of Korea.ORCID https://orcid.org/0000-0002-2675-106X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The recent advances in super-resolution fluorescence microscopy, including single-molecule localization microscopy (SMLM), has enabled the study of previously inaccessible details, such as the organization of proteins within cellular compartments and even nanostructures in nonbiological nanomaterials, such as the polymers and semiconductors. With such developments, the need for the development of various computational nanostructure analysis methods for SMLM images is also increasing; however, this has been limited to protein cluster analysis. In this study, we developed an edge structure analysis method for pointillistic SMLM images based on the line edge roughness and power spectral density analyses. By investigating the effect of point properties in SMLM images, such as the size, density, and localization precision on the roughness measurement, we successfully demonstrated this analysis method for experimental SMLM images of actual samples, including the semiconductor line patterns, cytoskeletal elements, and cell membranes. This systematic investigation of the effect of each localization rendering parameter on edge roughness measurement provides a range for the optimal rendering parameters that preserve the relevant nanoscale structure of interest. These new methods are expected to expand our understanding of the targets by providing valuable insights into edge nanoscale structures that have not been previously obtained quantitatively.

Indexed as

cell membrane roughnessedge roughness analysisline edge roughnesspower spectral densitysemiconductorsingle-molecule localization microscopy

Identifiers

PMID39635301
PMCPMC11501732

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.