Evidence map›Paper›PMID 39633210›Full record

ArticleJournal of imaging informatics in medicine2025

PixCUE: Joint Uncertainty Estimation and Image Reconstruction in MRI using Deep Pixel Classification.

Mevan Ekanayake, Kamlesh Pawar, Zhifeng Chen, Gary Egan, Zhaolin Chen

Erratum issuedAbstract read
In one paragraph

Article in Journal of imaging informatics in medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Mevan Ekanayake *Monash Biomedical Imaging, Monash University, Clayton, VIC, 3800, Australia.ORCID http://orcid.org/0000-0002-4768-5073
Kamlesh Pawar *Monash Biomedical Imaging, Monash University, Clayton, VIC, 3800, Australia.
Zhifeng ChenMonash Biomedical Imaging, Monash University, Clayton, VIC, 3800, Australia.
Gary EganMonash Biomedical Imaging, Monash University, Clayton, VIC, 3800, Australia.
Zhaolin ChenMonash Biomedical Imaging, Monash University, Clayton, VIC, 3800, Australia. zhaolin.chen@monash.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Deep learning (DL) models are effective in leveraging latent representations from MR data, emerging as state-of-the-art solutions for accelerated MRI reconstruction. However, challenges arise due to the inherent uncertainties associated with undersampling in k-space, coupled with the over- or under-parameterized and opaque nature of DL models. Addressing uncertainty has thus become a critical issue in DL MRI reconstruction. Monte Carlo (MC) inference techniques are commonly employed to estimate uncertainty, involving multiple reconstructions of the same scan to compute variance as a measure of uncertainty. Nevertheless, these methods entail significant computational expenses, requiring multiple inferences through the DL model. In this context, we propose a novel approach to uncertainty estimation during MRI reconstruction using a pixel classification framework. Our method, PixCUE (Pixel Classification Uncertainty Estimation), generates both the reconstructed image and an uncertainty map in a single forward pass through the DL model. We validate the efficacy of this approach by demonstrating that PixCUE-generated uncertainty maps exhibit a strong correlation with reconstruction errors across various MR imaging sequences and under diverse adversarial conditions. We present an empirical relationship between uncertainty estimations using PixCUE and established reconstruction metrics such as NMSE, PSNR, and SSIM. Furthermore, we establish a correlation between the estimated uncertainties from PixCUE and the conventional MC method. Our findings affirm that PixCUE reliably estimates uncertainty in MRI reconstruction with minimal additional computational cost.

Indexed as

Deep LearningImage Processing, Computer-AssistedMagnetic Resonance ImagingAlgorithmsBrainHumansMonte Carlo MethodUncertaintyConvolutional Neural NetworkDeep Learning Uncertainty EstimationMR Image ReconstructionPixel Classification Framework

Identifiers

PMID39633210
PMCPMC12343380

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.