Evidence map›Paper›PMID 39632943›Full record

ArticleScientific reports2024

Identification of CAP genes in finger lime (Citrus australasica) and their role in plant responses to abiotic and biotic stress.

Lamiaa M Mahmoud, Nabil Killiny, Manjul Dutt

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Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Lamiaa M MahmoudDepartment of Horticultural Sciences, Citrus Research and Education Center, University of Florida, Lake Alfred, FL, USA.
Nabil KillinyDepartment of Plant Pathology, Citrus Research and Education Center, University of Florida, Lake Alfred, USA.
Manjul DuttDepartment of Horticultural Sciences, Citrus Research and Education Center, University of Florida, Lake Alfred, FL, USA. manjul@ufl.edu.

Funding

National Institute of Food and Agriculture 2021-70029-36055
6 · The paper itself

Abstract

The study focuses on the in silico analysis of cysteine-rich secretory proteins and PR1-like (CAP) genes in finger lime (Citrus australasica), a citrus species known for its tolerance to Huanglongbing (HLB). We identified several PR1-like genes, all belonging to the CRISP family within the CAP superfamily. Of them, CaCAP2 transcript levels increased by over 300-fold in the finger lime compared to 'Valencia' sweet orange upon infection with 'Candidatus Liberibacter asiaticus' (CaLas). Localization studies using an EGFP fusion showed that the CAP2 protein is predominantly located in the nucleus, extracellular and plasma membrane. The study also examined CAP2 transcript levels in response to cold, drought stress, and salicylic acid application. Despite environmental stress causing apparent damage, CAP genes seem to play a significant role in managing both biotic and abiotic stresses. Analysis of CAP2 gene promoters from finger lime and sweet orange revealed 95.33% sequence identity, with variations in transcription factor-binding sites and cis-acting elements such as Stress Response Element (STRE: AGGGG), which might influence the differential expression of CAP2 between the two species. Additionally, expressing the finger lime-derived CaCAP2 gene in transgenic Nicotiana tabacum induced a strong defense response against Pseudomonas syringae pv. Tabaci., underscoring the CAP gene's crucial role in plant defense mechanisms against bacterial pathogens.

Indexed as

CitrusGene Expression Regulation, PlantPlant ProteinsStress, PhysiologicalDroughtsLiberibacterPhylogenyPlant DiseasesPromoter Regions, GeneticPlant ProteinsAbiotic and biotic stressCAP superfamilyFinger limeGenetic transformationHuanglongbingPathogenesis-related protein 1 (PR-1)Plant defense

Identifiers

PMID39632943
PMCPMC11618332

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.