Evidence map›Paper›PMID 39630659›Full record

ArticlePloS one2024

Effect of vegetable oil on ovarian steroidogenesis- A transcriptome approach to understand molecular mechanisms of hypothalamus pituitary and gonad axis (HPG) in Ompok bimaculatus.

Sagar Chandra Mandal, Partha Sarathi Tripathy, Ananya Khatei, Ningthoujam Chaoba Devi, Pradyut Biswas, Jitendra Kumar Sundaray, Farhana Hoque, Janmejay Parhi

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sagar Chandra MandalCollege of Fisheries, Central Agricultural University (Imphal), Lembucherra, Tripura, India.
Partha Sarathi TripathyFaculty of Biosciences and Aquaculture, Nord University, Bodø, Norway.
Ananya KhateiFaculty of Biosciences and Aquaculture, Nord University, Bodø, Norway.
Ningthoujam Chaoba DeviCollege of Fisheries, Central Agricultural University (Imphal), Lembucherra, Tripura, India.
Pradyut BiswasCollege of Fisheries, Central Agricultural University (Imphal), Lembucherra, Tripura, India.
Jitendra Kumar SundarayICAR-Central Institute of Freshwater Aquaculture, Bhubaneswar, Odisha, India.ORCID 0000-0001-9311-0636
Farhana HoqueICAR-Central Institute of Freshwater Aquaculture, Bhubaneswar, Odisha, India.
Janmejay ParhiCollege of Fisheries, Central Agricultural University (Imphal), Lembucherra, Tripura, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ompok bimaculatus is a commercially important food fish of Northeast India. For higher production of this species, the molecular mechanisms underlying its reproductive physiology is an important aspect to study. Vegetable oils are rich in ω3 and ω6 fatty acids and fat-soluble vitamins, that enhance reproductive performances. In the present study, O. bimaculatus were first fed with vegetable oil at 3, 5, 7 and 9% in the diet. The best treatment was determined by the analysis of relative fecundity, fertilisation rate, Gonadosomatic Index (GSI) and Hepatosomatic Index (HIS). Comparative transcriptomics analysis of gonadal tissues between control and best treatment was done using Illumina NextSeq500. The bioinformatics analysis by Trinity v2.11.0 and edgeR v3.32.1 identified 36 DEGs related to reproduction, those were later validated by qPCR analysis. The Differentially Expressed Genes (DEGs) revealed, regulation of Hypothalamic-pituitary-gonadal axis (HPG) axis through retinoid signalling pathway, IGF pathway and folliculogenesis pathway, including inhibitory effects of dietary vegetable oil on fish gonadal maturation.

Indexed as

OvaryPlant OilsTranscriptomeAnimalsFemaleGene Expression ProfilingGonadsHypothalamo-Hypophyseal SystemHypothalamusPlant Oils

Identifiers

PMID39630659
PMCPMC11616869

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.