Evidence map›Paper›PMID 39630374›Full record

ArticleBiochemical genetics2025

Novel Efficient Genome-Wide STR Panels for the Conservation of the Endemic Catfishes of Western Ghats: Critically Endangered Hemibagrus punctatus Jerdon (1849) and Vulnerable Horabagrus brachysoma (Günther, 1864).

P R Divya, Divya Merin Jose, Magdeline Christo, Charan Ravi, Uttam Kumar Sarkar

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Article in Biochemical genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

P R DivyaPAGR Centre, ICAR-National Bureau of Fish Genetic Resources Centre, CMFRI Campus, Kochi, India. divyanbfgr@gmail.com.
Divya Merin JosePAGR Centre, ICAR-National Bureau of Fish Genetic Resources Centre, CMFRI Campus, Kochi, India.
Magdeline ChristoPAGR Centre, ICAR-National Bureau of Fish Genetic Resources Centre, CMFRI Campus, Kochi, India.
Charan RaviPAGR Centre, ICAR-National Bureau of Fish Genetic Resources Centre, CMFRI Campus, Kochi, India.
Uttam Kumar SarkarICAR-National Bureau of Fish Genetic Resources Centre, Lucknow, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The IUCN classifies two-endemic fishes of the Western Ghats in Peninsular India: Nilgiri mystus Hemibagrus punctatus is critically endangered, and Yellow catfish Horabagrus brachysoma is vulnerable. These are threatened by habitat degradation, excess fishing, and dam construction. ICAR-NBFGR, the premier research organisation in India for fish conservation, aims to conserve these two species through captive propagation, stock identification, and stock-specific ranching programs. The information on this species' genetic diversity and population structure is crucial for the successful rehabilitation of the species. Microsatellite markers are considered suitable markers for genetic stock structure analyses. An attempt was made to identify microsatellite markers in H. brachysoma (n = 27) and H. punctatus (n = 31) using Illumina Sequencing technology. The preliminary studies show that markers are efficient enough to differentiate the genetic stocks of these conservation-important species across their range of natural distribution. Three genetic stocks are identified in H. brachysoma and two in H.punctatus using the developed markers.

Indexed as

CatfishesGenetic VariationMicrosatellite RepeatsAllelesAnimalsEcosystemIndiaSpecies SpecificityConservationMicrosatellite markersPopulation studyThreatened fish species

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.