Evidence map›Paper›PMID 39629247›Full record

ArticleEngineering microbiology2023

CRISPRi screen highlights chromatin regulation to be involved in formic acid tolerance in

Vaskar Mukherjee, Ibai Lenitz, Ulrika Lind, Anders Blomberg, Yvonne Nygård

Erratum issuedAbstract read
In one paragraph

Article in Engineering microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Metabolic engineering: Tools and applications.Engineering microbiology · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Vaskar MukherjeeDepartment of Life Sciences, Chalmers University of Technology, Gothenburg, Sweden.
Ibai LenitzDepartment of Life Sciences, Chalmers University of Technology, Gothenburg, Sweden.
Ulrika LindDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Anders BlombergDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Yvonne NygårdDepartment of Life Sciences, Chalmers University of Technology, Gothenburg, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Formic acid is one of the main weak acids in lignocellulosic hydrolysates that is known to be inhibitory to yeast growth even at low concentrations. In this study, we employed a CRISPR interference (CRISPRi) strain library comprising >9000 strains encompassing >98% of all essential and respiratory growth-essential genes, to study formic acid tolerance in

Indexed as

ChromatinCRISPRi libraryFormic acidLignocellulosic hydrolysatesScreeningToleranceYeast

Identifiers

PMID39629247
PMCPMC11611036

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.