Evidence map›Paper›PMID 39627708›Full record

ArticleBMC genomics2024

The varying responses of leaves and roots and the link between sugar metabolic genes and the SWEET family in Dendrobium officinale under salt stress.

Li Hao, Xin Shi, Shiyu Wen, Jiaqiang Chen, Kexin Luo, Yaqi Chen, Samo Yue, Caiye Yang, Yanxia Sun, Yi Zhang

Abstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Li HaoCollege of Food and Biological Engineering, Chengdu University, Chengdu, 610106, PR China.
Xin ShiCollege of Food and Biological Engineering, Chengdu University, Chengdu, 610106, PR China.
Shiyu WenCollege of Food and Biological Engineering, Chengdu University, Chengdu, 610106, PR China.
Jiaqiang ChenCollege of Food and Biological Engineering, Chengdu University, Chengdu, 610106, PR China.
Kexin LuoCollege of Food and Biological Engineering, Chengdu University, Chengdu, 610106, PR China.
Yaqi ChenCollege of Food and Biological Engineering, Chengdu University, Chengdu, 610106, PR China.
Samo YueCollege of Food and Biological Engineering, Chengdu University, Chengdu, 610106, PR China.
Caiye YangCollege of Food and Biological Engineering, Chengdu University, Chengdu, 610106, PR China.
Yanxia SunCollege of Food and Biological Engineering, Chengdu University, Chengdu, 610106, PR China.
Yi ZhangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, PR China. zhangyi1@cib.ac.cn.ORCID http://orcid.org/0000-0002-9319-4806

Funding

Key Laboratory of Medicinal and Edible Plant Resources Development of Sichuan Education Department 10Y202402Science and Technology Department of Sichuan Province 2024NSFSC1330
6 · The paper itself

Abstract

backgroundDendrobium officinale Kimura et Migo is a perennial epiphytic herb in traditional Chinese medicine, showing remarkable resistance to salt stress. Water-soluble sugars serve as important osmoprotectants and play crucial roles in plant stress responses. Previous studies have primarily focused on sugar metabolism in individual tissues under stress, resulting in a limited understanding of the regulatory differences between tissues and the relationship between sugar metabolism and transport.

resultsA variety of salt-responsive genes were identified through transcriptome analysis of D. officinale. GO and KEGG enrichment analyses revealed functional differences among the differentially expressed genes (DEGs) between leaves and roots. Expression analysis indicated that sugar metabolic genes and D. officinale Sugars Will Eventually be Exported Transporters (DoSWEETs) displayed distinct expression patterns in leaves and roots under salt stress. Most sugar metabolic genes were up-regulated in the leaves and down-regulated in the roots in response to salt, while DoSWEETs predominantly responded in the roots. Specifically, DoSWEET2a, 6a, 12a, 14, and 16 were confirmed via RT-qPCR. Additionally, positive correlations were observed between certain genes (scrK, INV, SUS) and DoSWEETs, with INV (LOC110096666) showing a strong positive correlation with all detected DoSWEETs in both leaves and roots.

conclusionsOur findings not only illustrated the distinct responses of leaves and roots to salt stress, but also highlighted the relationship between sugar metabolic genes and DoSWEETs in adapting to such stress. This enhances our understanding of the differential responses of plant tissues to salt stress and identified candidate genes for salt-resistance breeding in D. officinale.

Indexed as

DendrobiumGene Expression Regulation, PlantPlant LeavesPlant RootsSalt StressCarbohydrate MetabolismGene Expression ProfilingPlant ProteinsSugarsTranscriptomePlant ProteinsSugarsSugar biosynthesisSugar transportTissue-specific responseTranscriptome

Identifiers

PMID39627708
PMCPMC11613807

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.