Evidence map›Paper›PMID 39627368›Full record

ArticleNature plants2025

Plant microbiota feedbacks through dose-responsive expression of general non-self response genes.

Andreas Keppler, Michelle Roulier, Sebastian Pfeilmeier, Gabriella C Petti, Anna Sintsova, Benjamin A Maier, Miriam Bortfeld-Miller, Shinichi Sunagawa, Cyril Zipfel, Julia A Vorholt

Abstract read
In one paragraph

Article in Nature plants, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Microbial drivers of root plasticity.The New phytologist · 2025
    Review
  6. Review
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  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Andreas KepplerInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.ORCID 0009-0003-5084-4420
Michelle RoulierInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.
Sebastian PfeilmeierInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.
Gabriella C PettiInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.ORCID 0000-0001-9250-7746
Anna SintsovaInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.
Benjamin A MaierInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.
Miriam Bortfeld-MillerInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.
Shinichi SunagawaInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.ORCID 0000-0003-3065-0314
Cyril ZipfelInstitute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland.ORCID 0000-0003-4935-8583
Julia A VorholtInstitute of Microbiology, ETH Zurich, Zurich, Switzerland. jvorholt@ethz.ch.ORCID 0000-0002-6011-4910

Funding

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) 51NF40_180575
6 · The paper itself

Abstract

The ability of plants to perceive and react to biotic and abiotic stresses is critical for their health. We recently identified a core set of genes consistently induced by members of the leaf microbiota, termed general non-self response (GNSR) genes. Here we show that GNSR components conversely impact leaf microbiota composition. Specific strains that benefited from this altered assembly triggered strong plant responses, suggesting that the GNSR is a dynamic system that modulates colonization by certain strains. Examination of the GNSR to live and inactivated bacteria revealed that bacterial abundance, cellular composition and exposure time collectively determine the extent of the host response. We link the GNSR to pattern-triggered immunity, as diverse microbe- or danger-associated molecular patterns cause dynamic GNSR gene expression. Our findings suggest that the GNSR is the result of a dose-responsive perception and signalling system that feeds back to the leaf microbiota and contributes to the intricate balance of plant-microbiome interactions.

Indexed as

ArabidopsisGene Expression Regulation, PlantMicrobiotaPlant ImmunityGenes, PlantPlant Leaves

Identifiers

PMID39627368
PMCPMC11757152

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.