Evidence map›Paper›PMID 39625435›Full record

ArticleTranslational vision science & technology2024

CNN-Based Device-Agnostic Feature Extraction From ONH OCT Scans.

Sjoerd J Driessen, Karin A van Garderen, Danilo Andrade De Jesus, Luisa Sanchez Brea, João Barbosa-Breda, Bart Liefers, Hans G Lemij, Doreen Nelson-Ayifah, Angelina Ampong, Pieter W M Bonnemaijer and 2 more

Abstract read
In one paragraph

Article in Translational vision science & technology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

12 authors.

Sjoerd J DriessenDepartment of Ophthalmology, Erasmus Medical Center, Rotterdam, The Netherlands.
Karin A van GarderenDepartment of Ophthalmology, Erasmus Medical Center, Rotterdam, The Netherlands.
Danilo Andrade De JesusEye Image Analysis Group Rotterdam, Department of Ophthalmology, Erasmus Medical Center, Rotterdam, The Netherlands.
Luisa Sanchez BreaEye Image Analysis Group Rotterdam, Department of Ophthalmology, Erasmus Medical Center, Rotterdam, The Netherlands.
João Barbosa-BredaResearch Group Ophthalmology, Department of Neurosciences, KU Leuven, Leuven, Belgium.
Bart LiefersDepartment of Ophthalmology, Erasmus Medical Center, Rotterdam, The Netherlands.
Hans G LemijGlaucoma Service, Rotterdam Eye Hospital, Rotterdam, The Netherlands.
Doreen Nelson-AyifahDepartment of Ophthalmology, Komfo Anokye Teaching Hospital, Kumasi, Ghana.
Angelina AmpongDepartment of Ophthalmology, Komfo Anokye Teaching Hospital, Kumasi, Ghana.
Pieter W M BonnemaijerDepartment of Epidemiology, Erasmus Medical Center, Rotterdam, The Netherlands.
Alberta A H J ThiadensDepartment of Ophthalmology, Erasmus Medical Center, Rotterdam, The Netherlands.
Caroline C W KlaverDepartment of Ophthalmology, Erasmus Medical Center, Rotterdam, The Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: Optical coherence tomography (OCT)-derived measurements of the optic nerve head (ONH) from different devices are not interchangeable. This poses challenges to patient follow-up and collaborative studies. Here, we present a device-agnostic method for the extraction of OCT biomarkers using artificial intelligence. Methods: ONH-centered OCT volumes from the Heidelberg SPECTRALIS, ZEISS CIRRUS HD-OCT 5000, and Topcon 3D OCT-1000 Mark I/II and 3D OCT-2000 devices were annotated by trained graders. A convolutional neural network (CNN) was trained on these segmented B-scans and utilized to obtain several ONH biomarkers, such as the retinal nerve fiber layer (RNFL) and the minimal rim width (MRW). The CNN results were compared between different devices and to the manufacturer-reported values using an independent test set. Results: The intraclass correlation coefficient (ICC) for the circumpapillary retinal nerve fiber layer (cpRNFL) at 3.4 mm reported by the CIRRUS and 3D OCT-2000 was 0.590 (95% confidence interval [CI], -0.079 to 0.901), and our CNN resulted in a cpRNFL ICC of 0.667 (95% CI, -0.035 to 0.939). The cpRNFL at 3.5 mm on the CIRRUS, 3D OCT-2000, and SPECTRALIS generated by the CNN resulted in an ICC of 0.656 (95% CI, 0.055-0.922). Comparing the global mean MRWs from the SPECTRALIS between CNN and manufacturer yielded an ICC of 0.983 (95% CI, 0.917-0.997). The CNN ICC for the MRW among the CIRRUS, 3D OCT-2000, and SPECTRALIS was 0.917 (95% CI, 0.947-0.981). Conclusions: Our device-agnostic feature extraction from ONH OCT scans showed a higher reliability than the measures generated by the manufacturers for cpRNFL. MRW measurements compared very well among the manufacturers. Translational Relevance: This open-source software can robustly extract a wide range of biomarkers from any OCT device, removing the dependency on manufacturer-specific algorithms, which has significant implications for patient follow-up and collaborative research.

Indexed as

Neural Networks, ComputerOptic DiskTomography, Optical CoherenceAdultAgedFemaleHumansMaleMiddle AgedNerve FibersRetinal Ganglion Cells

Identifiers

PMID39625435
PMCPMC11620008

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.