Evidence map›Paper›PMID 39622972›Full record

ArticleNature structural & molecular biology2025

Substrate translocation and inhibition in human dicarboxylate transporter NaDC3.

Yan Li, Jinmei Song, Vedrana Mikusevic, Jennifer J Marden, Alissa Becerril, Huihui Kuang, Bing Wang, William J Rice, Joseph A Mindell, Da-Neng Wang

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Elevator mechanism dynamics in a sodium-coupled dicarboxylate transporter.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Article
  7. Structure and Inhibition of the Human NaInternational journal of molecular sciences · 2025
    Article
  8. Cryo-EM structures reveal the HLife science alliance · 2025
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yan LiDepartment of Cell Biology, New York University School of Medicine, New York, NY, USA.
Jinmei SongDepartment of Cell Biology, New York University School of Medicine, New York, NY, USA.
Vedrana MikusevicPorter Neuroscience Research Center, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA.
Jennifer J MardenDepartment of Cell Biology, New York University School of Medicine, New York, NY, USA.
Alissa BecerrilPorter Neuroscience Research Center, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA.
Huihui KuangCryo-Electron Microscopy Core, New York University School of Medicine, New York, NY, USA.
Bing WangCryo-Electron Microscopy Core, New York University School of Medicine, New York, NY, USA.
William J RiceDepartment of Cell Biology, New York University School of Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-5187-255X
Joseph A MindellPorter Neuroscience Research Center, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA. mindellj@ninds.nih.gov.ORCID http://orcid.org/0000-0002-6952-8247
Da-Neng WangDepartment of Cell Biology, New York University School of Medicine, New York, NY, USA. da-neng.wang@med.nyu.edu.ORCID http://orcid.org/0000-0002-6496-4699

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MARK Reid PHILIPS · 1985 to 2026
$83.1M
Transport Cycle and Inhibition of Human Na+-dicarboxylate Cotransporter NaDC3R01NS108151 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI DANENG WANG · 2018 to 2026
$4.1M
Transport Mechanisms and Inhibition of Efflux Pumps in Pathogenic OrganismsR01AI165782 · NIAID · NEW YORK UNIVERSITY · PI SHOHEI KOIDE, Nathaniel J. Traaseth · 2022 to 2026
$4.0M
Dynamics and mechanism of sodium-dependent carboxylate transportersR01DK135088 · NIDDK · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Ruben L Gonzalez, Emad Tajkhorshid · 2023 to 2026
$2.6M
Structural basis of the Ragulator-Rag GTPase complex as a platform for mTOR activation on the lysosomal surfaceR01GM121994 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WANG, DANENG · 2017 to 2020
$1.5M
NCI NIH HHS P30 CA016087NIAID NIH HHS R01 AI165782NIDDK NIH HHS R01 DK135088NIGMS NIH HHS R01 GM121994NINDS NIH HHS R01 NS108151
6 · The paper itself

Abstract

The human high-affinity sodium-dicarboxylate cotransporter (NaDC3) imports various substrates into the cell as tricarboxylate acid cycle intermediates, lipid biosynthesis precursors and signaling molecules. Understanding the cellular signaling process and developing inhibitors require knowledge of the structural basis of the dicarboxylate specificity and inhibition mechanism of NaDC3. To this end, we determined the cryo-electron microscopy structures of NaDC3 in various dimers, revealing the protomer in three conformations: outward-open C

Indexed as

Dicarboxylic Acid TransportersOrganic Anion Transporters, Sodium-DependentSymportersCryoelectron MicroscopyDicarboxylic AcidsFusion Regulatory Protein 1, Heavy ChainHumansModels, MolecularProtein ConformationSubstrate SpecificityDicarboxylic AcidsDicarboxylic Acid TransportersFusion Regulatory Protein 1, Heavy ChainOrganic Anion Transporters, Sodium-DependentSLC3A2 protein, humanSymporters

Identifiers

PMID39622972
PMCPMC12645469

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.