Evidence map›Paper›PMID 39622820›Full record

ArticleNature communications2024

Structural evolution of nitrogenase states under alkaline turnover.

Rebeccah A Warmack, Douglas C Rees

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Molecular basis of NNature communications · 2026
    Article
  2. A Proposed Complete-Cycle Mechanism for Conversion of NChembiochem : a European journal of chemical biology · 2026
    Article
  3. Structure-informed engineering of plant-microbe interactions.The Plant journal : for cell and molecular biology · 2026
    Review
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Rebeccah A WarmackDivision of Chemistry and Chemical Engineering 147-75 California Institute of Technology, Pasadena, CA, USA. rwarmack@caltech.edu.ORCID 0000-0002-9612-0511
Douglas C ReesDivision of Chemistry and Chemical Engineering 147-75 California Institute of Technology, Pasadena, CA, USA. dcrees@caltech.edu.ORCID 0000-0003-4073-1185

Funding

In situ mechanisms of biological nitrogen fixationK99GM152765 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI WARMACK, REBECCAH · 2024 to 2025
$247k
Atomic Models of Nitrogen Fixation by Nitrogenase from CryoEM StructuresF32GM143836 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI WARMACK, REBECCAH · 2021 to 2022
$136k
NIGMS NIH HHS F32 GM143836NIGMS NIH HHS K99 GM152765U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) 1F32GM143836U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) 1K99GM152765
6 · The paper itself

Abstract

Biological nitrogen fixation, performed by the enzyme nitrogenase, supplies nearly 50% of the bioavailable nitrogen pool on Earth, yet the structural nature of the enzyme intermediates involved in this cycle remains ambiguous. Here we present four high resolution cryoEM structures of the nitrogenase MoFe-protein, sampled along a time course of alkaline reaction mixtures under an acetylene atmosphere. This series of structures reveals a sequence of salient changes including perturbations to the inorganic framework of the FeMo-cofactor; depletion of the homocitrate moiety; diminished density around the S2B belt sulfur of the FeMo-cofactor; rearrangements of cluster-adjacent side chains; and the asymmetric displacement of the FeMo-cofactor. We further demonstrate that the nitrogenase associated factor T protein can recognize and bind an alkaline inactivated MoFe-protein in vitro. These time-resolved structures provide experimental support for the displacement of S2B and distortions of the FeMo-cofactor at the E

Indexed as

MolybdoferredoxinNitrogenaseNitrogen FixationAcetyleneAzotobacter vinelandiiBacterial ProteinsCryoelectron MicroscopyModels, MolecularNitrogenProtein ConformationTricarboxylic AcidsAcetyleneBacterial Proteinshomocitric acidMolybdoferredoxinNitrogenNitrogenaseTricarboxylic Acids

Identifiers

PMID39622820
PMCPMC11612016

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.