Evidence map›Paper›PMID 39622799›Full record

ArticleNature communications2024

Image-guided optogenetic spatiotemporal tissue patterning using μPatternScope.

Sant Kumar, Hannes M Beyer, Mingzhe Chen, Matias D Zurbriggen, Mustafa Khammash

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sant Kumar *Department of Biosystems Science and Engineering (D-BSSE), ETH Zürich, Klingelbergstrasse 48, 4056, Basel, Switzerland.ORCID 0000-0002-4056-8501
Hannes M Beyer *Institute of Synthetic Biology, Heinrich-Heine-University Düsseldorf, Universitätsstrasse 1, D-40225, Düsseldorf, Germany.ORCID 0000-0002-6882-006X
Mingzhe ChenDepartment of Biosystems Science and Engineering (D-BSSE), ETH Zürich, Klingelbergstrasse 48, 4056, Basel, Switzerland.
Matias D ZurbriggenInstitute of Synthetic Biology, Heinrich-Heine-University Düsseldorf, Universitätsstrasse 1, D-40225, Düsseldorf, Germany. matias.zurbriggen@uni-duesseldorf.de.ORCID 0000-0002-3523-2907
Mustafa KhammashDepartment of Biosystems Science and Engineering (D-BSSE), ETH Zürich, Klingelbergstrasse 48, 4056, Basel, Switzerland. mustafa.khammash@bsse.ethz.ch.ORCID 0000-0002-4855-9220

Funding

EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 801041
6 · The paper itself

Abstract

In the field of tissue engineering, achieving precise spatiotemporal control over engineered cells is critical for sculpting functional 2D cell cultures into intricate morphological shapes. In this study, we engineer light-responsive mammalian cells and target them with dynamic light patterns to realize 2D cell culture patterning control. To achieve this, we developed μPatternScope (μPS), a modular framework for software-controlled projection of high-resolution light patterns onto microscope samples. μPS comprises hardware and software suite governing pattern projection and microscope maneuvers. Together with a 2D culture of the engineered cells, we utilize μPS for controlled spatiotemporal induction of apoptosis to generate desired 2D shapes. Furthermore, we introduce interactive closed-loop patterning, enabling a dynamic feedback mechanism between the measured cell culture patterns and the light illumination profiles to achieve the desired target patterning trends. Our work offers innovative tools for advanced tissue engineering applications through seamless fusion of optogenetics, optical engineering, and cybernetics.

Indexed as

OptogeneticsTissue EngineeringAnimalsApoptosisCell Culture TechniquesHumansLightMiceSoftware

Identifiers

PMID39622799
PMCPMC11612157

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.