Evidence map›Paper›PMID 39622652›Full record

ArticleParasites, hosts and diseases2024

Identification of essential genes for Acanthamoeba castellanii excystation during encystation and excystation.

Min-Jeong Kim, Hye-Jeong Jo, Fu-Shi Quan, Ki Back Chu, Hyun-Hee Kong, Eun-Kyung Moon

Abstract read
In one paragraph

Article in Parasites, hosts and diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Encystment and Excystment Processes inPathogens (Basel, Switzerland) · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Min-Jeong KimDepartment of Biomedical Science, Graduate School, Kyung Hee University, Seoul 02447, Korea; 2Department of Medical Zoology, Kyung Hee University School of Medicine, Seoul 02447, Korea.
Hye-Jeong JoDepartment of Biomedical Science, Graduate School, Kyung Hee University, Seoul 02447, Korea; 2Department of Medical Zoology, Kyung Hee University School of Medicine, Seoul 02447, Korea.
Fu-Shi QuanDepartment of Medical Zoology, Kyung Hee University School of Medicine, Seoul 02447, Korea.
Ki Back ChuDepartment of Parasitology, Inje University College of Medicine, Busan 47392, Korea.
Hyun-Hee KongDepartment of Parasitology, Dong-A University College of Medicine, Busan 49201, Korea.
Eun-Kyung MoonDepartment of Medical Zoology, Kyung Hee University School of Medicine, Seoul 02447, Korea.

Funding

Ministry of Science and ICTNational Research Foundation of Korea RS-2024-00346635
6 · The paper itself

Abstract

Acanthamoeba is an opportunistic pathogen that causes Acanthamoeba keratitis, granulomatous amoebic encephalitis, and other cutaneous diseases. The life cycle of Acanthamoeba consists of 2 stages of trophozoites and cysts. Under adverse environmental conditions, Acanthamoeba encysts, while the conditions become favorable for growth, it reverts to the trophozoite form. Acanthamoeba excystation is crucial for its proliferation and can lead to recurrent infections after incomplete treatment. To identify the factors involved in excystation, A. castellanii was subjected to either encystation- or excystation-inducing conditions, and gene expression profiles were compared using mRNA sequencing. A. castellanii samples were collected at 8 h intervals for analysis under both conditions. Differentially expressed gene analysis revealed that 1,214 and 1,163 genes were upregulated and downregulated, respectively, by more than 2-fold during early excystation. Five genes markedly upregulated in early excystation (ACA1_031140, ACA1_032330, ACA1_374400, ACA1_275740, and ACA1_112650) were selected, and their expression levels were confirmed via real-time PCR. Small interfering RNA (siRNA) targeting these 5 genes was transfected into Acanthamoeba and gene knockdown was validated through real-time PCR. The silencing of ACA1_031140, ACA1_032330, ACA1_374400, and ACA1_112650 inhibited excystation and suggested that these genes might be essential for excystation. Our findings provide valuable insights for suppressing Acanthamoeba proliferation and recurrence.

Indexed as

Acanthamoeba castellaniiGene Expression ProfilingGenes, EssentialGenes, ProtozoanLife Cycle StagesParasite EncystmentProtozoan ProteinsTrophozoitesProtozoan ProteinsAcanthamoebaencystationexcystationgene knockdown

Identifiers

PMID39622652
PMCPMC11614486

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.