Evidence map›Paper›PMID 39621770›Full record

ArticlePLoS pathogens2024

Chickpea NCR13 disulfide cross-linking variants exhibit profound differences in antifungal activity and modes of action.

James Godwin, Arnaud Thierry Djami-Tchatchou, Siva L S Velivelli, Meenakshi Tetorya, Raviraj Kalunke, Ambika Pokhrel, Mowei Zhou, Garry W Buchko, Kirk J Czymmek, Dilip M Shah

Abstract read
In one paragraph

Article in PLoS pathogens, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

James GodwinDonald Danforth Plant Science Center, St. Louis, Missouri, United States of America.ORCID 0000-0001-6941-5309
Arnaud Thierry Djami-TchatchouDonald Danforth Plant Science Center, St. Louis, Missouri, United States of America.ORCID 0000-0002-7496-449X
Siva L S VelivelliDonald Danforth Plant Science Center, St. Louis, Missouri, United States of America.ORCID 0000-0002-6831-241X
Meenakshi TetoryaDonald Danforth Plant Science Center, St. Louis, Missouri, United States of America.ORCID 0000-0002-1529-3331
Raviraj KalunkeDonald Danforth Plant Science Center, St. Louis, Missouri, United States of America.ORCID 0000-0003-0110-2888
Ambika PokhrelDonald Danforth Plant Science Center, St. Louis, Missouri, United States of America.ORCID 0009-0001-4604-8670
Mowei ZhouEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington, United States of America.ORCID 0000-0003-3575-3224
Garry W BuchkoEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington, United States of America.ORCID 0000-0002-3639-1061
Kirk J CzymmekDonald Danforth Plant Science Center, St. Louis, Missouri, United States of America.ORCID 0000-0002-5471-7395
Dilip M ShahDonald Danforth Plant Science Center, St. Louis, Missouri, United States of America.ORCID 0000-0001-9503-4729

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small cysteine-rich antifungal peptides with multi-site modes of action (MoA) have potential for development as biofungicides. In particular, legumes of the inverted repeat-lacking clade express a large family of nodule-specific cysteine-rich (NCR) peptides that orchestrate differentiation of nitrogen-fixing bacteria into bacteroids. These NCRs can form two or three intramolecular disulfide bonds and a subset of these peptides with high cationicity exhibits antifungal activity. However, the importance of intramolecular disulfide pairing and MoA against fungal pathogens for most of these plant peptides remains to be elucidated. Our study focused on a highly cationic chickpea NCR13, which has a net charge of +8 and contains six cysteines capable of forming three disulfide bonds. NCR13 expression in Pichia pastoris resulted in formation of two peptide folding variants, NCR13_PFV1 and NCR13_PFV2, that differed in the pairing of two out of three disulfide bonds despite having an identical amino acid sequence. The NMR structure of each PFV revealed a unique three-dimensional fold with the PFV1 structure being more compact but less dynamic. Surprisingly, PFV1 and PFV2 differed profoundly in the potency of antifungal activity against several fungal plant pathogens and their multi-faceted MoA. PFV1 showed significantly faster fungal cell-permeabilizing and cell entry capabilities as well as greater stability once inside the fungal cells. Additionally, PFV1 was more effective in binding fungal ribosomal RNA and inhibiting protein translation in vitro. Furthermore, when sprayed on pepper and tomato plants, PFV1 was more effective in reducing disease symptoms caused by Botrytis cinerea, causal agent of gray mold disease in fruits, vegetables, and flowers. In conclusion, our work highlights the significant impact of disulfide pairing on the antifungal activity and MoA of NCR13 and provides a structural framework for design of novel, potent antifungal peptides for agricultural use.

Indexed as

Antifungal AgentsCicerDisulfidesPlant DiseasesPlant ProteinsAmino Acid SequenceBotrytisFusariumPeptidesAntifungal AgentsDisulfidesPeptidesPlant Proteins

Identifiers

PMID39621770
PMCPMC11637438

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.