Evidence map›Paper›PMID 39621754›Full record

ArticlePLoS computational biology2024

Homeodynamic feedback inhibition control in whole-brain simulations.

Jan Stasinski, Halgurd Taher, Jil Mona Meier, Michael Schirner, Dionysios Perdikis, Petra Ritter

Abstract read
In one paragraph

Article in PLoS computational biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jan StasinskiBerlin Institute of Health at Charité, Universitätsmedizin Berlin, Berlin, Germany.ORCID 0009-0006-2074-5642
Halgurd TaherBerlin Institute of Health at Charité, Universitätsmedizin Berlin, Berlin, Germany.
Jil Mona MeierBerlin Institute of Health at Charité, Universitätsmedizin Berlin, Berlin, Germany.
Michael SchirnerBerlin Institute of Health at Charité, Universitätsmedizin Berlin, Berlin, Germany.
Dionysios PerdikisBerlin Institute of Health at Charité, Universitätsmedizin Berlin, Berlin, Germany.
Petra RitterBerlin Institute of Health at Charité, Universitätsmedizin Berlin, Berlin, Germany.ORCID 0000-0002-4643-4782

Funding

Mapping the Human Connectome: Structure, Function, and HeritabilityU54MH091657 · NIMH · WASHINGTON UNIVERSITY · PI UGURBIL, KAMIL, VAN ESSEN, DAVID C · 2010 to 2014
$34.7M
NIMH NIH HHS U54 MH091657
6 · The paper itself

Abstract

Simulations of large-scale brain dynamics are often impacted by overexcitation resulting from heavy-tailed structural network distributions, leading to biologically implausible simulation results. We implement a homeodynamic plasticity mechanism, known from other modeling work, in the widely used Jansen-Rit neural mass model for The Virtual Brain (TVB) simulation framework. We aim at heterogeneously adjusting the inhibitory coupling weights to reach desired dynamic regimes in each brain region. We show that, by using this dynamic approach, we can control the target activity level to obtain biologically plausible brain simulations, including post-synaptic potentials and blood-oxygen-level-dependent functional magnetic resonance imaging (fMRI) activity. We demonstrate that the derived dynamic Feedback Inhibitory Control (dFIC) can be used to enable increased variability of model dynamics. We derive the conditions under which the simulated brain activity converges to a predefined target level analytically and via simulations. We highlight the benefits of dFIC in the context of fitting the TVB model to static and dynamic measures of fMRI empirical data, accounting for global synchronization across the whole brain. The proposed novel method helps computational neuroscientists, especially TVB users, to easily "tune" brain models to desired dynamical regimes depending on the specific requirements of each study. The presented method is a steppingstone towards increased biological realism in brain network models and a valuable tool to better understand their underlying behavior.

Indexed as

BrainComputer SimulationMagnetic Resonance ImagingModels, NeurologicalComputational BiologyFeedback, PhysiologicalHumansNerve NetNeuronal Plasticity

Identifiers

PMID39621754
PMCPMC11637364

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.