Evidence map›Paper›PMID 39620205›Full record

ArticlePlant and soil2023

Zinc Localization and Speciation in Rice Grain Under Variable Soil Zinc Deficiency.

Yating Shen, Elizabeth Wiita, Athena A Nghiem, Jingyu Liu, Ezazul Haque, Rachel N Austin, Chheng Y Seng, Kongkea Phan, Yan Zheng, Benjamin C Bostick

Abstract read
In one paragraph

Article in Plant and soil, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yating ShenLamont-Doherty Earth Observatory of Columbia University, Palisades, New York, NY 10964, USA.ORCID 0000-0002-7902-6419
Elizabeth WiitaLamont-Doherty Earth Observatory of Columbia University, Palisades, New York, NY 10964, USA.
Athena A NghiemLamont-Doherty Earth Observatory of Columbia University, Palisades, New York, NY 10964, USA.ORCID 0000-0001-9135-0804
Jingyu LiuState Environmental Protection Key Laboratory of Integrated Surface Water-Groundwater Pollution Control, School of Environmental Science and Engineering, Southern University of Science and Technology, Shenzhen 518055, China.ORCID 0000-0002-8310-2242
Ezazul HaqueIDGP in Human Toxicology and Department of Occupational and Environmental Health, University of Iowa, Iowa City, IA 52242, USA.ORCID 0000-0002-3225-713X
Rachel N AustinBarnard College, Department of Chemistry, New York, NY 10027, USA.
Chheng Y SengDepartment of Food Chemistry, Faculty of Science and Technology, International University, Phnom Penh 12101, Cambodia.
Kongkea PhanDepartment of Food Chemistry, Faculty of Science and Technology, International University, Phnom Penh 12101, Cambodia.ORCID 0000-0003-2965-8415
Yan ZhengLamont-Doherty Earth Observatory of Columbia University, Palisades, New York, NY 10964, USA.ORCID 0000-0001-5256-9395
Benjamin C BostickLamont-Doherty Earth Observatory of Columbia University, Palisades, New York, NY 10964, USA.ORCID 0000-0002-7513-6469

Funding

Training CoreP42ES010349 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI NAVAS-ACIEN, ANA · 2000 to 2020
$53.6M
Research Experience and Training Coordination CoreP42ES033719 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MARCIA O'LEARY · 2022 to 2026
$11.9M
NIEHS NIH HHS P42 ES010349NIEHS NIH HHS P42 ES033719
6 · The paper itself

Abstract

Background and Aims: Rice accounts for around 20% of the calories consumed by humans. Essential nutrients like zinc (Zn) are crucial for rice growth and for populations relying on rice as a staple food. No well-established study method exists. As a result, we a lack a clear picture of the chemical forms of zinc in rice grain. Furthermore, we do not understand the effects of widespread and variable zinc deficiency in soils on the Zn speciation, and to a lesser extent, its concentration, in grain. Methods: The composition and Zn speciation of Cambodian rice grain is analyzed using synchrotron-based microprobe X-ray fluorescence (μ-XRF) and extended X-ray absorption fine-structure spectroscopy (EXAFS). We developed a method to quantify Zn species in different complexes based on the coordination numbers of Zn to oxygen and sulfur at characteristic bond lengths. Results: Zn levels in brown rice grain ranged between 15-30 mg kg Conclusion: Zn speciation in rice grain is affected by Zn deficiency more than previously recognized. A majority of Zn was bound in phytate complexes in rice grain. Zinc phytate complexes were found in higher concentrations and also in higher proportions, in Zn-deficient soils, consistent with increased phytate production under Zn deficiency. Phytates are generally not bioavailable to humans, so low soil Zn fertility may not only impact grain yields, but also decrease the fraction of grain Zn bioavailable to human consumers. The potential impact of abundant Zn-phytate in environments deficient in Zn on human bioavailability and Zn deficiency requires additional research.

Indexed as

bioaccessibilitybioavailabilitymicro-XRFphytate ZnZn deficiencyZn EXAFS

Identifiers

PMID39620205
PMCPMC11606578

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.