Evidence map›Paper›PMID 39619252›Full record

ArticleHuman biology2023

Analysis of Posttraumatic Stress Disorder Gene Expression Profiles in a Prospective, Community-Based Cohort.

Jan Dahrendorff, Agaz Wani, Thomas Keller, Don Armstrong, Annie Qu, Derek E Wildman, Maria Carmen Valero, Karestan C Koenen, Allison E Aiello, Monica Uddin

Abstract read
In one paragraph

Article in Human biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. DNA Methylation ofBiomolecules · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jan DahrendorffGenomics Program, College of Public Health, University of South Florida, Tampa, FL.
Agaz WaniGenomics Program, College of Public Health, University of South Florida, Tampa, FL.
Thomas KellerGenomics Program, College of Public Health, University of South Florida, Tampa, FL.
Don ArmstrongDepartment of Psychology, University of Illinois at Urbana-Champaign, Urbana, IL.
Annie QuDepartment of Statistics, University of California Irvine, Irvine, CA.
Derek E WildmanGenomics Program, College of Public Health, University of South Florida, Tampa, FL.
Maria Carmen ValeroDepartment of Molecular Genetics & Microbiology, University of Florida, Gainesville, FL.
Karestan C KoenenDepartment of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA\.
Allison E AielloRobert N Butler Columbia Aging Center, Mailman School of Public Health, Columbia University, New York, NY.
Monica UddinGenomics Program, College of Public Health, University of South Florida, Tampa, FL.

Funding

Epigenomic Predictors of PTSD and Traumatic Stress in an African American CohortR01MD011728 · NIMHD · UNIVERSITY OF SOUTH FLORIDA · PI AIELLO, ALLISON E, UDDIN, MONICA · 2017 to 2025
$5.7M
Ecologic Stressors, PTSD, and Drug Use in DetroitR01DA022720 · NIDA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI AIELLO, ALLISON E · 2007 to 2011
$4.7M
Candidate Epigenetic Biomarkers For PTSD: Insights From DetroitRC1MH088283 · NIMH · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI AIELLO, ALLISON E · 2009 to 2010
$995k
NIDA NIH HHS R01 DA022720NIMHD NIH HHS R01 MD011728NIMH NIH HHS RC1 MH088283
6 · The paper itself

Abstract

Post-traumatic stress disorder (PTSD) is a common and debilitating psychiatric disorder that may occur in individuals exposed to traumatic events such as accidents, interpersonal violence, war, combat, or natural disasters. Additionally, PTSD has been implicated in the development of a variety of chronic conditions including cardiovascular and metabolic diseases, suggesting that the biological alterations associated with the disorder can manifest themselves as chronic diseases in those suffering from PTSD. The biological underpinnings of the disorder are not well understood. Gene expression studies can illuminate the complex physiology of PTSD reflecting the embodiment of trauma, i.e., the process in which traumatic experiences in our social environments could potentially be manifested in our body by genomic mechanisms. To date, gene expression studies that examine the whole transcriptome are scarce and limited to single-timepoint assessments. Here we applied a transcriptome-wide gene expression screen with RNA-sequencing to whole blood samples from predominantly African-American participants in a community-dwelling setting to elucidate the gene expression signatures associated with the development of PTSD. The study participants (N=72, of whom 21 eventually developed PTSD) are a trauma-exposed subsample of participants enrolled in a longitudinal and prospective cohort study of adults living in Detroit, Michigan. PTSD was assessed in a structured telephone interview and whole blood samples were taken both before and after trauma exposure. We found 45 differentially expressed genes associated with PTSD development with an estimated log2 fold change > 1.5 at a nominal p-value (pPAX6, TSPAN7, PXDN, VWC2, SULF1, and NFATC4 were also ubiquitously expressed in all brain regions. Longitudinal sampling provides a promising mean to elucidate the pathophysiology underlying the embodiment of trauma.

Identifiers

PMID39619252
PMCPMC11606054

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.