Evidence map›Paper›PMID 39619195›Full record

ArticlePeerJ2024

Effects of temperature and size class on the gut digesta microbiota of the sea urchin

Ruber Rodríguez-Barreras, Eduardo L Tosado-Rodríguez, Anelisse Dominicci-Maura, Filipa Godoy-Vitorino

Abstract read
In one paragraph

Article in PeerJ, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Strengthening Integrative Microbiome Research Through Regional Leadership.International journal of environmental research and public health · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ruber Rodríguez-BarrerasDepartment of Biology, University of Puerto Rico at Bayamón, Bayamón, PR, USA.ORCID 0000-0001-7790-6108
Eduardo L Tosado-RodríguezMicrobiology and Medical Zoology, University of Puerto Rico, School of Medicine Medical Sciences Campus, San Juan, PR, USA.ORCID 0000-0002-9140-8671
Anelisse Dominicci-MauraMicrobiology and Medical Zoology, University of Puerto Rico, School of Medicine Medical Sciences Campus, San Juan, PR, USA.
Filipa Godoy-VitorinoMicrobiology and Medical Zoology, University of Puerto Rico, School of Medicine Medical Sciences Campus, San Juan, PR, USA.ORCID 0000-0003-1880-0498

Funding

SCIENCE AND TECHNOLOGY COMPETENCY & EDUCATION CORE (STCE)P20GM103475 · NIGMS · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI Jose R. Rodriguez-Medina · 2012 to 2026
$52.9M
Upstream Regulation and Downstream effectors of c-MYC in Ovarian CancerU54MD007600 · NIMHD · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI Souhail M Malave-Rivera · 2017 to 2026
$35.8M
NIGMS NIH HHS P20 GM103475NIMHD NIH HHS U54 MD007600
6 · The paper itself

Abstract

Background: Understanding the dynamics of the gut microbiota in sea urchins is crucial for comprehending the ecological balance in marine ecosystems. The gut microbiota plays a vital role in nutrient metabolism, immune system modulation, and pathogen protection. The microbial composition and dynamics of naturally occurring sea urchin Methods: Thirty-six naturally occurring large individuals and six small individuals (42 animals) were collected from shallow waters on the northeastern coast of Puerto Rico in February and August of 2019. The fecal pellet's microbiota was characterized by sequencing V4 region of the 16S rRNA gene. Results: We found significant differences in the composition of fecal pellet microbiota between seasons and life stages. Phylum Bacteroidota had greater relative abundance in August, while Firmicutes was more dominant in February. Discussion: This is the first report for this species in the Caribbean region and adds to our comprehension of the microbiota of the white sea urchin across collection periods and size classes, highlighting the dynamic nature of the gut microbiota.

Indexed as

Gastrointestinal MicrobiomeRNA, Ribosomal, 16SSeasonsSea UrchinsTemperatureAnimalsFecesPuerto RicoRNA, Ribosomal, 16S16S rRNA geneMicrobiotaPuerto RicoSea urchinTripneustes ventricosus

Identifiers

PMID39619195
PMCPMC11608566

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.