Evidence map›Paper›PMID 39615460›Full record

ArticleEBioMedicine2024

A retrospective genomic characterisation of the 2022 mpox outbreak in Belgium, and in vitro assessment of three antiviral compounds.

Tony Wawina-Bokalanga, Bert Vanmechelen, Anne-Sophie Logist, Mandy Bloemen, Lies Laenen, Sébastien Bontems, Marie-Pierre Hayette, Cécile Meex, Christelle Meuris, Catherine Orban and 6 more

Abstract read
In one paragraph

Article in EBioMedicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Genomic characterization and infectivity assessment of Monkeypox virus from the 2022 Croatian outbreak.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Tony Wawina-BokalangaDepartment of Microbiology, Immunology and Transplantation, KU Leuven, Rega Institute, Laboratory of Clinical and Epidemiological Virology, 3000, Leuven, Belgium; Institut National de Recherche Biomédicale (INRB), Kinshasa, Democratic Republic of the Congo; Département de Biologie Médicale, Service de Microbiologie, Cliniques Universitaires de Kinshasa, Université de Kinshasa, Kinshasa, Democratic Republic of the Congo. Electronic address: tony.wawina@kuleuven.be.
Bert VanmechelenDepartment of Microbiology, Immunology and Transplantation, KU Leuven, Rega Institute, Laboratory of Clinical and Epidemiological Virology, 3000, Leuven, Belgium.
Anne-Sophie LogistDepartment of Microbiology, Immunology and Transplantation, KU Leuven, Rega Institute, Laboratory of Clinical and Epidemiological Virology, 3000, Leuven, Belgium.
Mandy BloemenDepartment of Microbiology, Immunology and Transplantation, KU Leuven, Rega Institute, Laboratory of Clinical and Epidemiological Virology, 3000, Leuven, Belgium.
Lies LaenenDepartment of Laboratory Medicine, University Hospitals Leuven, 3000, Leuven, Belgium; Department of Microbiology, Immunology and Transplantation, KU Leuven, Laboratory of Clinical Microbiology, 3000, Leuven, Belgium.
Sébastien BontemsDepartment of Clinical Microbiology, University Hospital of Liege, 4000, Liege, Belgium.
Marie-Pierre HayetteDepartment of Clinical Microbiology, University Hospital of Liege, 4000, Liege, Belgium.
Cécile MeexDepartment of Clinical Microbiology, University Hospital of Liege, 4000, Liege, Belgium.
Christelle MeurisDepartment of Infectious Diseases and General Internal Medicine, University Hospital of Liege, 4000, Liege, Belgium.
Catherine OrbanDepartment of Infectious Diseases and General Internal Medicine, University Hospital of Liege, 4000, Liege, Belgium.
Emmanuel AndréDepartment of Laboratory Medicine, University Hospitals Leuven, 3000, Leuven, Belgium; Department of Microbiology, Immunology and Transplantation, KU Leuven, Laboratory of Clinical Microbiology, 3000, Leuven, Belgium.
Robert SnoeckDepartment of Microbiology, Immunology and Transplantation, KU Leuven, Rega Institute, Laboratory of Virology and Chemotherapy, 3000, Leuven, Belgium.
Guy BaeleDepartment of Microbiology, Immunology and Transplantation, KU Leuven, Rega Institute, Laboratory of Clinical and Epidemiological Virology, 3000, Leuven, Belgium.
Samuel L HongDepartment of Microbiology, Immunology and Transplantation, KU Leuven, Rega Institute, Laboratory of Clinical and Epidemiological Virology, 3000, Leuven, Belgium.
Graciela AndreiDepartment of Microbiology, Immunology and Transplantation, KU Leuven, Rega Institute, Laboratory of Virology and Chemotherapy, 3000, Leuven, Belgium.
Piet MaesDepartment of Microbiology, Immunology and Transplantation, KU Leuven, Rega Institute, Laboratory of Clinical and Epidemiological Virology, 3000, Leuven, Belgium. Electronic address: piet.maes@kuleuven.be.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSince the beginning of May 2022, cases of mpox have been reported in several European and American countries where the disease is nonendemic. We performed a retrospective genomic characterisation of the 2022 mpox outbreak in Belgium, and assessed the in vitro sensitivity of three antiviral compounds to a monkeypox virus (MPXV) strain from the 2022 outbreak.

methodsWe sequenced the complete genomes of MPXV isolated from skin-, throat-, anorectal- and genital swab samples using the Oxford Nanopore Technologies (ONT) GridION. We subsequently analysed high-quality complete MPXV genomes and conducted a genomic analysis of MPXV complete genomes from this study with all other complete MPXV genomes available on GISAID up to October 28th, 2022. The in vitro activity of tecovirimat, brincidofovir, and cidofovir was also tested in human and monkey cell lines.

findingsWe produced 248 complete MPXV genomes. Phylogenetic analysis of the complete MPXV genomes revealed that they all belong to MPXV Clade IIb B.1. Surprisingly, through phylogeographic analysis we identified a minimum number of 79 introduction events into Belgium, along with sustained local transmission. We also demonstrated the superior in vitro efficacy and selectivity of tecovirimat to the 2022 MPXV clinical strain.

interpretationThe number of sequences provides sufficient information about the MPXV lineages that were circulating in Belgium. The 2022 mpox outbreak, in Belgium, was mainly characterised by many introduction events that were promptly contained and resulted in limited human-to-human transmission of MPXV. The in vitro efficacy of antivirals against a 2022 MPXV Belgian strain highlights the potent activity and specificity of tecovirimat and its ability to prevent the formation of the extracellular enveloped viruses.

fundingNone.

Indexed as

Antiviral AgentsDisease OutbreaksGenome, ViralPhylogenyAnimalsBelgiumCell LineGenomicsHumansMonkeypox virusMpox, MonkeypoxRetrospective StudiesWhole Genome SequencingAntiviral AgentsAntiviralsGenomic analysisMonkeypox virusmpoxTecovirimatWhole-genome sequencing

Identifiers

PMID39615460
PMCPMC11648162

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.