Evidence map›Paper›PMID 39614199›Full record

ArticleBMC cancer2024

SKA1/2/3 is a prognostic and predictive biomarker in esophageal adenocarcinoma and squamous cell carcinoma.

Liming Zhang, Shaoqiang Wang, Lina Wang

Abstract read
In one paragraph

Article in BMC cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Liming ZhangMedical Research Center, Affiliated Hospital of Jining Medical University, Jining Medical University, Jining, Shandong Province, 272029, P. R. China.
Shaoqiang WangDepartment of Thoracic Surgery, Weifang People's Hospital, Weifang, Shandong Province, 261000, P. R. China.
Lina WangMedical Research Center, Affiliated Hospital of Jining Medical University, Jining Medical University, Jining, Shandong Province, 272029, P. R. China. wanglina_china@163.com.ORCID http://orcid.org/0000-0003-1457-0015

Funding

National Natural Science Foundation of China 81800182National Natural Science Foundation of China 81802290
6 · The paper itself

Abstract

backgroundEsophageal carcinoma (ESCA) ranks among the most prevalent malignant tumors globally. Despite significant advancements in treatment options and improved patient outcomes, the 5-year survival rate remains unsatisfactory. The spindle and kinetochore associated complex subunit 1/2/3 (SKA1/2/3) attached to the kinetochore (KT) in the metaphase of mitosis are implicated in the occurrence and development of various tumors. However, the expression patterns, diagnostic significance and prognostic implications of SKA1/2/3 in ESCA have not been comprehensively determined.

methodsTCGA, UALCAN, Kaplan-Meier Plotter, and TIMER databases were leveraged to dissect the expression patterns, prognostic implications and diagnostic value of SKA1/2/3 in ESCA patients, as well as to investigate the potential regulatory mechanism of SKA1/2/3 in the onset and progression of ESCA.

resultsIn ESCA, SKA1/2/3 exhibited substantial expression, with higher levels relating significantly with clinicopathological features and patient prognosis. Enrichment analysis of genes co-expressed with SKA1/2/3 highlighted their involvement in the cell cycle, DNA replication and p53 signaling pathway. Protein-protein interaction (PPI) analysis identified ten hub genes that were not only markedly upregulated but also portended a poor prognosis in ESCA. Additionally, immune infiltration assays uncovered a significant link between SKA1/2/3 expression and the immune cell infiltration within ESCA. Silencing of SKA1/2/3 significantly suppresses cell proliferation and migration, while concurrently promoting apoptosis in ESCA cells.

conclusionsSKA1/2/3 may serve as promising biomarkers for the prognosis and diagnosis of ESCA, which holds promise as a novel therapeutic target for the disease.

Indexed as

Biomarkers, TumorChromosomal Proteins, Non-HistoneEsophageal NeoplasmsAdenocarcinomaCarcinoma, Squamous CellCell Cycle ProteinsCell Line, TumorCell ProliferationFemaleGene Expression Regulation, NeoplasticHumansKaplan-Meier EstimateMaleMicrotubule-Associated ProteinsPrognosisBiomarkers, TumorCell Cycle ProteinsChromosomal Proteins, Non-HistoneMicrotubule-Associated ProteinsSKA1 protein, humanSKA2 protein, humanSka3 protein, humanBioinformatics analysisDiagnosisEsophageal carcinoma (ESCA)Prognostic biomarkerSKA1/2/3

Identifiers

PMID39614199
PMCPMC11607974

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.