Evidence map›Paper›PMID 39614175›Full record

ArticleBMC medical research methodology2024

Understanding the impact of covariates on the classification of implementation units for soil-transmitted helminths control: a case study from Kenya.

Amitha Puranik, Peter J Diggle, Maurice R Odiere, Katherine Gass, Stella Kepha, Collins Okoyo, Charles Mwandawiro, Florence Wakesho, Wycliff Omondi, Hadley Matendechero Sultani and 1 more

Abstract read
In one paragraph

Article in BMC medical research methodology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Amitha PuranikCentre for Health Informatics, Computing, and Statistics (CHICAS), Lancaster Medical School, Lancaster University, Lancaster, United Kingdom.
Peter J DiggleCentre for Health Informatics, Computing, and Statistics (CHICAS), Lancaster Medical School, Lancaster University, Lancaster, United Kingdom.
Maurice R OdiereCentre for Global Health Research, Kenya Medical Research Institute, Kisumu, Kenya.
Katherine GassNeglected Tropical Diseases Support Center (NTD-SC), Task Force for Global Health, Atlanta, USA.
Stella KephaDivision of Vector Borne and Neglected Tropical Diseases, Ministry of Health, Nairobi, Kenya.
Collins OkoyoEastern and Southern Africa Centre of International Parasite Control (ESACIPAC), Kenya Medical Research Institute, Nairobi, Kenya.
Charles MwandawiroEastern and Southern Africa Centre of International Parasite Control (ESACIPAC), Kenya Medical Research Institute, Nairobi, Kenya.
Florence WakeshoDivision of Vector Borne and Neglected Tropical Diseases, Ministry of Health, Nairobi, Kenya.
Wycliff OmondiDivision of Vector Borne and Neglected Tropical Diseases, Ministry of Health, Nairobi, Kenya.
Hadley Matendechero SultaniState Department for Public Health and Professional Standards, Ministry of Health, Nairobi, Kenya.
Emanuele GiorgiCentre for Health Informatics, Computing, and Statistics (CHICAS), Lancaster Medical School, Lancaster University, Lancaster, United Kingdom. e.giorgi@lancaster.ac.uk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSoil-transmitted helminthiasis (STH) are a parasitic infection that predominantly affects impoverished regions. Model-based geostatistics (MBG) has been established as a set of modern statistical methods that enable mapping of disease risk in a geographical area of interest. We investigate how the use of remotely sensed covariates can help to improve the predictive inferences on STH prevalence using MBG methods. In particular, we focus on how the covariates impact on the classification of areas into distinct class of STH prevalence.

methodsThis study uses secondary data obtained from a sample of 1551 schools in Kenya, gathered through a combination of longitudinal and cross-sectional surveys. We compare the performance of two geostatistical models: one that does not make use of any spatially referenced covariate; and a second model that uses remotely sensed covariates to assist STH prevalence prediction. We also carry out a simulation study in which we compare the performance of the two models in the classifications of areal units with varying sample sizes and prevalence levels.

resultsThe model with covariates generated lower levels of uncertainty and was able to classify 88 more districts into prevalence classes than the model without covariates, which instead left those as "unclassified". The simulation study showed that the model with covariates also yielded a higher proportion of correct classification of at least 40% for all sub-counties.

conclusionCovariates can substantially reduce the uncertainty of the predictive inference generated from geostatistical models. Using covariates can thus contribute to the design of more effective STH control strategies by reducing sample sizes without compromising the predictive performance of geostatistical models.

Indexed as

HelminthiasisSoilAnimalsChildCross-Sectional StudiesHelminthsHumansKenyaModels, StatisticalPrevalenceSoilGeostatistical methodsKenyaSoil-transmitted helminthiasisSpatially referenced covariatesSTH transmission classes

Identifiers

PMID39614175
PMCPMC11606136

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.