Evidence map›Paper›PMID 39612313›Full record

ArticlePlant biotechnology journal2025

Single-cell transcriptomic profiling of maize cell heterogeneity and systemic immune responses against Puccinia polysora Underw.

Xiao-Cui Yan, Qing Liu, Qian Yang, Kai-Lai Wang, Xiu-Zhen Zhai, Meng-Yun Kou, Jia-Long Liu, Shang-Tong Li, Shu-Han Deng, Miao-Miao Li and 1 more

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Review
  3. Single-cell insights into plant growth, adaptation, and evolution.Journal of integrative plant biology · 2026
    Review
  4. Article
  5. Review
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  14. Review
  15. Article
  16. Advances in Research on Southern Corn Rust, a Devasting Fungal Disease.International journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xiao-Cui Yan *State Key Laboratory of North China Crop Improvement and Regulation Key Laboratory of Crop Germplasm Resources in North China, Ministry of Education, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, China.ORCID https://orcid.org/0000-0003-0507-1388
Qing Liu *State Key Laboratory of North China Crop Improvement and Regulation Key Laboratory of Vegetable Germplasm Innovation and Utilization of Hebei, College of Life Sciences, Hebei Agricultural University, Baoding, China.
Qian Yang *State Key Laboratory of North China Crop Improvement and Regulation Key Laboratory of Crop Germplasm Resources in North China, Ministry of Education, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, China.
Kai-Lai Wang *Glbizzia Biosciences, Beijing, China.
Xiu-Zhen ZhaiState Key Laboratory of North China Crop Improvement and Regulation Key Laboratory of Crop Germplasm Resources in North China, Ministry of Education, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, China.
Meng-Yun KouState Key Laboratory of North China Crop Improvement and Regulation Key Laboratory of Crop Germplasm Resources in North China, Ministry of Education, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, China.
Jia-Long LiuState Key Laboratory of North China Crop Improvement and Regulation Key Laboratory of Crop Germplasm Resources in North China, Ministry of Education, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, China.
Shang-Tong LiGlbizzia Biosciences, Beijing, China.
Shu-Han DengGlbizzia Biosciences, Beijing, China.
Miao-Miao LiKey Laboratory of Seed Innovation, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Hui-Jun DuanState Key Laboratory of North China Crop Improvement and Regulation Key Laboratory of Crop Germplasm Resources in North China, Ministry of Education, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, China.

Funding

Provincial Key Research and Development program 22326515DSpecial program for Talent Introduction NCCIR2021RC-6State Key Laboratory of North China Crop Improvement and Regulation NCCIR2022ZZ-4
6 · The paper itself

Abstract

Southern corn rust (SCR), caused by Puccinia polysora Underw (P. polysora), is a catastrophic disease affecting maize, leading to significant global yield losses. The disease manifests primarily as pustules on the upper surface of corn leaves, obscuring our understanding of its cellular heterogeneity, the maize's response to its infection and the underlying gene expression regulatory mechanisms. In this study, we dissected the heterogeneity of maize's response to P. polysora infection using single-cell RNA sequencing. We delineated cell-type-specific gene expression alterations in six leaf cell types, creating the inaugural single-cell atlas of a maize leaf under fungal assault. Crucially, by reconstructing cellular trajectories in susceptible line N110 and resistant line R99 during infection, we identified diverse regulatory programs that fortify R99's resistance across different leaf cell types. This research uncovers an immune-like state in R99 leaves, characterized by the expression of various fungi-induced genes in the absence of fungal infection, particularly in guard and epidermal cells. Our findings also highlight the role of the fungi-induced glycoside hydrolase family 18 chitinase 7 protein (ZmChit7) in conferring resistance to P. polysora. Collectively, our results shed light on the mechanisms of maize resistance to fungal pathogens through comparative single-cell transcriptomics, offering a valuable resource for pinpointing novel genes that bolster resistance to P. polysora.

Indexed as

Plant DiseasesPlant ImmunityPucciniaTranscriptomeZea maysDisease ResistanceGene Expression ProfilingGene Expression Regulation, PlantPlant LeavesSingle-Cell AnalysisMaizeMolecular markerPuccinia polysora UnderwResistance differencesSingle‐cell TranscriptomicZmChit7

Identifiers

PMID39612313
PMCPMC11772323

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.