Evidence map›Paper›PMID 39609930›Full record

ArticleEnvironmental microbiome2024

Ecology and biogeochemistry of the microbial underworld in two sister soda lakes.

Alexandre J Paquette, Srijak Bhatnagar, Agasteswar Vadlamani, Timber Gillis, Varada Khot, Breda Novotnik, Hector De la Hoz Siegler, Marc Strous, Jayne E Rattray

Abstract read
In one paragraph

Article in Environmental microbiome, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Alexandre J PaquetteDepartment of Earth, Energy, and Environment, University of Calgary, 2500 University Drive, Calgary, AB, T2N 1N4, Canada. alexandre.paquette@ucalgary.ca.
Srijak BhatnagarFaculty of Science and Technology, Athabasca University, 1 University Dr, Athabasca, AB T9S 3A3, Canada.
Agasteswar VadlamaniDepartment of Earth, Energy, and Environment, University of Calgary, 2500 University Drive, Calgary, AB, T2N 1N4, Canada.
Timber GillisDepartment of Biological Sciences, University of Calgary, 2500 University Drive, Calgary, AB, T2N 1N4, Canada.
Varada KhotDepartment of Earth, Energy, and Environment, University of Calgary, 2500 University Drive, Calgary, AB, T2N 1N4, Canada.
Breda NovotnikDepartment of Earth, Energy, and Environment, University of Calgary, 2500 University Drive, Calgary, AB, T2N 1N4, Canada.
Hector De la Hoz SieglerDepartment of Chemical and Petroleum Engineering, University of Calgary, 2500 University Drive, Calgary, AB, T2N 1N4, Canada.
Marc StrousDepartment of Earth, Energy, and Environment, University of Calgary, 2500 University Drive, Calgary, AB, T2N 1N4, Canada.
Jayne E RattrayDepartment of Biological Sciences, University of Calgary, 2500 University Drive, Calgary, AB, T2N 1N4, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundApproximately 3.7 billion years ago, microbial life may have emerged in phosphate-rich salty ponds. Surprisingly, analogs of these environments are present in alkaline lake systems, recognized as highly productive biological ecosystems. In this study, we investigate the microbial ecology of two Canadian soda lake sediment systems characterized by naturally high phosphate levels.

resultsUsing a comprehensive approach involving geochemistry, metagenomics, and amplicon sequencing, we discovered that groundwater infiltration into Lake Goodenough sediments supported stratified layers of microbial metabolisms fueled by decaying mats. Effective degradation of microbial mats resulted in unexpectedly low net productivity. Evaporation of water from Last Chance Lake and its sediments led to saturation of brines and a habitat dominated by inorganic precipitation reactions, with low productivity, low organic matter turnover and little biological uptake of phosphorus, leading to high phosphate concentrations. Highly alkaline brines were found to be dominated by potentially dormant spore-forming bacteria. These saturated brines also hosted potential symbioses between Halobacteria and Nanoarchaeaota, as well as Lokiarchaea and bacterial sulfate reducers. Metagenome-assembled genomes of Nanoarchaeaota lacked strategies for coping with salty brines and were minimal for Lokiarchaea.

conclusionsOur research highlights that modern analogs for origin-of-life conditions might be better represented by soda lakes with low phosphate concentrations. Thus, highly alkaline brine environments could be too extreme to support origin of life scenarios. These findings shed light on the complex interplay of microbial life in extreme environments and contribute to our understanding of early Earth environments.

Indexed as

Alkaline brinesExtreme environmentsMetagenomicsMicrobial metabolismMicrobial symbiosesOrigin of lifeSoda lakes

Identifiers

PMID39609930
PMCPMC11606062

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.