Evidence map›Paper›PMID 39609866›Full record

ArticleIMA fungus2024

Different metabolite profiles across Penicillium roqueforti populations associated with ecological niche specialisation and domestication.

E Crequer, E Coton, G Cueff, J V Cristiansen, J C Frisvad, R C Rodríguez de la Vega, T Giraud, J-L Jany, M Coton

Abstract read
In one paragraph

Article in IMA fungus, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

E CrequerLaboratoire Universitaire de Biodiversité Et Ecologie Microbienne, Univ. Brest, INRAE, 29280, Plouzane, France.
E CotonLaboratoire Universitaire de Biodiversité Et Ecologie Microbienne, Univ. Brest, INRAE, 29280, Plouzane, France.
G CueffLaboratoire Universitaire de Biodiversité Et Ecologie Microbienne, Univ. Brest, INRAE, 29280, Plouzane, France.
J V CristiansenDepartment of Biotechnology and Biomedicine, Technical University of Denmark, 2800, Kongens Lyngby, Denmark.
J C FrisvadDepartment of Biotechnology and Biomedicine, Technical University of Denmark, 2800, Kongens Lyngby, Denmark.
R C Rodríguez de la VegaLaboratoire Ecologie Systématique et Evolution, UMR 8079, AgroParisTech, Université Paris-Saclay, CNRS, Bâtiment 680, 12 Route RD 128, 91190, Gif-Sur-Yvette, France.
T GiraudLaboratoire Ecologie Systématique et Evolution, UMR 8079, AgroParisTech, Université Paris-Saclay, CNRS, Bâtiment 680, 12 Route RD 128, 91190, Gif-Sur-Yvette, France.
J-L JanyLaboratoire Universitaire de Biodiversité Et Ecologie Microbienne, Univ. Brest, INRAE, 29280, Plouzane, France.
M CotonLaboratoire Universitaire de Biodiversité Et Ecologie Microbienne, Univ. Brest, INRAE, 29280, Plouzane, France. monika.coton@univ-brest.fr.ORCID http://orcid.org/0000-0002-0148-6802

Funding

Agence Nationale de la Recherche ANR-19-CE20-0002-02
6 · The paper itself

Abstract

Fungi are known to produce many chemically diversified metabolites, yet their ecological roles are not always fully understood. The blue cheese fungus Penicillium roqueforti thrives in different ecological niches and is known to produce a wide range of metabolites, including mycotoxins. Three P. roqueforti populations have been domesticated for cheese production and two populations thrive in other anthropized environments, i.e., food, lumber and silage. In this study, we looked for differences in targeted and untargeted metabolite production profiles between populations using HPLC-HR-Q-TOF and UHPLC-Q-TOF-HR-MS/MS. The non-cheese populations produced several fatty acids and different terpenoids, lacking in cheese strains. The Termignon cheese population displayed intermediate metabolite profiles between cheese and non-cheese populations, as previously shown for other traits. The non-Roquefort cheese population with the strongest domestication syndrome, produced the lowest quantities of measured metabolites, including mycophenolic acid (MPA), andrastin A and PR toxin. Its inability to produce MPA was due to a deletion in the mpaC gene, while a premature stop codon in ORF 11 of the PR toxin gene cluster explained PR toxin absence and the accumulation of its intermediates, i.e., eremofortins A and B. In the Roquefort population, we detected no PR toxin nor eremofortins A or B, but found no indel or frameshift mutation, suggesting downregulation. The hypotoxigenic trait of domesticated cheese populations can be hypothesized to be linked to the loss of this ability through trait degeneration and/or the selection of low toxin producers. It may also be due to the fact that populations from other anthropized environments maintained high metabolite diversity as the bioactivities of these compounds are likely important in these ecological niches.

Indexed as

AdaptationDomesticationFood safetyFungal metabolitesMetabolomicsMycotoxinsSecondary metabolites

Identifiers

PMID39609866
PMCPMC11605963

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.