Evidence map›Paper›PMID 39605745›Full record

ArticlebioRxiv : the preprint server for biology2025

Boltz-1 Democratizing Biomolecular Interaction Modeling.

Jeremy Wohlwend, Gabriele Corso, Saro Passaro, Noah Getz, Mateo Reveiz, Ken Leidal, Wojtek Swiderski, Liam Atkinson, Tally Portnoi, Itamar Chinn and 3 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Jeremy WohlwendMIT CSAIL.ORCID 0000-0002-1993-2380
Gabriele CorsoMIT CSAIL.ORCID 0000-0002-1963-8755
Saro PassaroMIT CSAIL.
Noah GetzMIT CSAIL.
Mateo ReveizMIT CSAIL.ORCID 0000-0002-5680-4150
Ken LeidalGenesis Research, a part of Genesis Therapeutics.
Wojtek SwiderskiGenesis Research, a part of Genesis Therapeutics.
Liam AtkinsonCHARM Therapeutics.
Tally PortnoiMIT CSAIL.ORCID 0000-0002-8543-7855
Itamar ChinnMIT CSAIL.ORCID 0000-0001-5449-8818
Jacob SilterraMIT CSAIL.ORCID 0000-0001-9159-5836
Tommi JaakkolaMIT CSAIL.ORCID 0000-0002-2199-0379
Regina BarzilayMIT CSAIL.

Funding

Graduate Training in Computational and Systems BiologyT32GM087237 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BURGE, CHRISTOPHER B · 2009 to 2023
$4.6M
MATCHMAKERS - Creating and training AI tools for TCR binding prediction and designOT2CA297463 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Michael Birnbaum · 2024 to 2026
$2.6M
Cancer Research UK CGCATF-2023/100001NCI NIH HHS OT2 CA297463NIGMS NIH HHS T32 GM087237
6 · The paper itself

Abstract

Understanding biomolecular interactions is fundamental to advancing fields like drug discovery and protein design. In this paper, we introduce Boltz-1, an open-source deep learning model incorporating innovations in model architecture, speed optimization, and data processing achieving Alphafold3-level accuracy in predicting the 3D structures of biomolecular complexes. Boltz-1 demonstrates a performance on-par with state-of-the-art commercial models on a range of diverse benchmarks, setting a new benchmark for commercially accessible tools in structural biology. Further, we push the boundary of capabilities of these models with Boltz-steering, a new inference time steering technique that is able to fix hallucinations and non-physical predictions from the models. By releasing the training and inference code, model weights, datasets, and benchmarks under the MIT open license, we aim to foster global collaboration, accelerate discoveries, and provide a robust platform for advancing biomolecular modeling.

Identifiers

PMID39605745
PMCPMC11601547

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.