Evidence map›Paper›PMID 39605692›Full record

ArticlebioRxiv : the preprint server for biology2024

Shroom3-Rock interaction and profibrotic function: Resolving mechanism of an intronic CKD risk allele.

Anand Reghuvaran, Ashwani Kumar, Qisheng Lin, Nallakandi Rajeevan, Zeguo Sun, Hongmei Shi, Gabriel Barsotti, E M Tanvir, John Pell, Sudhir Perincheri and 10 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Anand ReghuvaranSection of Nephrology, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, USA.ORCID 0000-0002-5656-0205
Ashwani KumarSection of Nephrology, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, USA.
Qisheng LinDepartment of Nephrology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, 200127, PRC.ORCID 0000-0002-5149-2717
Nallakandi RajeevanBiomedical Informatics and Data Science, Yale University School of Medicine, New Haven, CT, USA.
Zeguo SunDivision of Nephrology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0001-5542-2284
Hongmei ShiSection of Nephrology, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, USA.
Gabriel BarsottiSection of Nephrology, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, USA.
E M TanvirSection of Nephrology, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, USA.
John PellSection of Nephrology, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, USA.
Sudhir PerincheriDepartment of Pathology, Yale University School of Medicine, New Haven, CT, USA.
Chengguo WeiDivision of Nephrology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Marina PlanouteneDivision of Nephrology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Anne EichmannDepartment of Molecular and Cellular Physiology, Yale University School of Medicine, New Haven, CT, USA.ORCID 0000-0001-5563-210X
Valeria MasSurgical Sciences Division, Department of Surgery, School of Medicine, University of Maryland, Baltimore, MD, USA.
Weijia ZhangDivision of Nephrology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Bhaskar DasUniversity at Buffalo, SUNY Buffalo, Buffalo NY, USA.
Lloyd CantleySection of Nephrology, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, USA.
Leyuan XuSection of Nephrology, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, USA.ORCID 0000-0002-3071-9206
Cijiang John HeDivision of Nephrology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Madhav C MenonSection of Nephrology, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, USA.ORCID 0000-0002-9567-4299

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Macrophage Function in Kidney RepairR01DK093771 · NIDDK · YALE UNIVERSITY · PI LLOYD G CANTLEY · 2012 to 2026
$3.9M
Dichotomous roles of Shroom3 in Tubular cells and Podocytes in native and allograft kidneysR01DK122164 · NIDDK · YALE UNIVERSITY · PI Madhav C Menon · 2019 to 2026
$2.7M
Role of AMP-kinase pathway in the regulation of Minimal change disease-to-FSGS transitionR01DK132274 · NIDDK · YALE UNIVERSITY · PI Madhav C Menon · 2023 to 2026
$2.1M
Modelling mechanisms of progressive chronic kidney disease in APOL1 high-risk live-donors using BAC-Transgenic miceR21AI178705 · NIAID · YALE UNIVERSITY · PI ISHIBE, SHUTA, MENON, MADHAV C · 2023 to 2024
$461k
NCATS NIH HHS UL1 TR001863NIAID NIH HHS R21 AI178705NIDDK NIH HHS R01 DK093771NIDDK NIH HHS R01 DK122164NIDDK NIH HHS R01 DK132274
6 · The paper itself

Abstract

Common intronic enhancer SNPs in Shroom3 associate with CKD in GWAS, although there is paucity of detailed mechanism. Previously, we reported a role for Shroom3 in mediating crosstalk between TGFβ1- & Wnt/Ctnnb1 pathways promoting renal fibrosis (TIF). However, beneficial roles for Shroom3 in proteinuria have also been reported suggesting pleiotropic effects. Here we focused on identifying the specific profibrotic Shroom3 motif. Given known therapeutic roles for Rho-kinase inhibitors in experimental CKD, and the established interaction between Shroom3 and Rock via its ASD2 domain, we hypothesized that Shroom3-mediated ROCK activation played a crucial role in its profibrotic function in high expressors. To test this hypothesis, we developed transgenic mice and cell lines that inducibly overexpressed wild-type- (WT-Sh3) or ASD2-domain deletion- Shroom3 (ASD2Δ-Sh3). Prior scRNAseq data showed that during TIF, Shroom3 and Rock co-expression occurred in injured tubular cells and fibroblasts, highlighting cell-types where this mechanism could be involved. Using HEK293T cells, we first confirmed absent ROCK binding and inhibited TGFβ1-signaling with ASD2Δ-Sh3-overexpression vs WT-Sh3. In mIMCD cells, ASD2Δ-Sh3 overexpression, reduced Rock activation (phospho-MYPT1), pro-fibrotic and pro-inflammatory transcripts vs WT-Sh3. Fibroblast proliferation (3T3) was also reduced with ASD2Δ-Sh3.

Identifiers

PMID39605692
PMCPMC11601673

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.