Evidence map›Paper›PMID 39605349›Full record

ArticlebioRxiv : the preprint server for biology2024

Free water elimination tractometry for aging brains.

Kelly Chang, Luke Burke, Nina LaPiana, Bradley Howlett, David Hunt, Margaret Dezelar, Jalal B Andre, Patti Curl, James D Ralston, Ariel Rokem and 1 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Kelly ChangDepartment of Psychology, University of Washington.ORCID 0000-0001-5385-2782
Luke BurkeKaiser Permanente Washington Health Research Institute.
Nina LaPianaDepartment of Neurological Surgery, University of Washington.ORCID 0000-0001-7940-3221
Bradley HowlettDepartment of Neurological Surgery, University of Washington.ORCID 0000-0002-8651-754X
David HuntDepartment of Neurological Surgery, University of Washington.ORCID 0000-0003-0590-874X
Margaret DezelarKaiser Permanente Washington Health Research Institute.ORCID 0000-0002-6217-8686
Jalal B AndreDepartment of Radiology, University of Washington.ORCID 0000-0002-0896-183X
Patti CurlDepartment of Radiology, University of Washington.ORCID 0000-0003-2295-2670
James D RalstonKaiser Permanente Washington Health Research Institute.
Ariel RokemDepartment of Psychology, University of Washington.ORCID 0000-0003-0679-1985
Christine L Mac DonaldDepartment of Neurological Surgery, University of Washington.ORCID 0000-0002-7419-996X

Funding

Translational pharmacoepidemiology: neuroprotection and neurotoxicity of antihypertensives and strong anticholinergicsU19AG066567 · NIA · KAISER FOUNDATION RESEARCH INSTITUTE · PI Christine L MacDonald · 2021 to 2026
$80.4M
Furthering scientific understanding of mechanisms underlying resilience to the effects of AD pathology by incorporating state of the art quantification of gliosis, inflammation, & synaptic toxicityU01AG006781 · NIA · UNIVERSITY OF WASHINGTON · PI CRANE, PAUL K, LARSON, ERIC B · 1986 to 2020
$39.3M
Reclaiming and Revitalizing ACT Neuroimaging RecordsRF1AG056326 · NIA · UNIVERSITY OF WASHINGTON · PI CRANE, PAUL K, MACDONALD, CHRISTINE L · 2018 to 2018
$3.7M
CRCNS: Community-supported open-source software for computational neuroanatomyR01EB027585 · NIBIB · TRUSTEES OF INDIANA UNIVERSITY · PI Eleftherios Garyfallidis · 2018 to 2026
$2.6M
CRCNS: Integrating gray and white matter data to understand the organization of human visual cortexR01EY033628 · NEI · UNIVERSITY OF WASHINGTON · PI Noah C Benson, JONATHAN A WINAWER · 2021 to 2026
$1.7M
NIPreps: integrating neuroimaging preprocessing workflows across modalities, populations, and speciesRF1MH121867 · NIMH · STANFORD UNIVERSITY · PI POLDRACK, RUSSELL A, ROKEM, ARIEL SHALOM · 2021 to 2022
$1.6M
A data science toolbox for analysis of Human Connectome Project diffusion MRIRF1MH121868 · NIMH · UNIVERSITY OF WASHINGTON · PI ROKEM, ARIEL SHALOM · 2019 to 2019
$707k
NEI NIH HHS R01 EY033628NIA NIH HHS RF1 AG056326NIA NIH HHS U01 AG006781NIA NIH HHS U19 AG066567NIBIB NIH HHS R01 EB027585NIMH NIH HHS RF1 MH121867NIMH NIH HHS RF1 MH121868
6 · The paper itself

Abstract

Tractometry of diffusion-weighted magnetic resonance imaging (dMRI) non-invasively quantifies tissue properties of brain connections. It is widely used in aging studies but could be less reliable in aging brains due to increased white matter free water. We demonstrate that computational free water elimination (FWE) increases reliability and accuracy of tractometry in a large (n = 339) cohort of older adults (66 - 103 y.o.). We found substantial (up to ~37%) improvements in reliability in a split-half comparison at every stage of the pipeline: estimation of voxel-level fiber orientation distribution functions, delineation of major pathway trajectories, and assessment of tissue properties along the pathways. FWE also improves inferences from tractometry, producing more accurate cross-validated predictions of clinician Fazekas scores. By sub-sampling a multi-b-value dataset, we demonstrated that these findings generalize to both single-b-value data, which is important for many datasets where only one b-value may be available. Overall, the results highlight the importance of accounting for free water in tractometry studies, especially in aging brains. We provide open-source software for free-water elimination that can be applied to a wide range of clinical and research datasets (https://github.com/nrdg/fwe).

Indexed as

agingdiffusion imagingfree-water eliminationtractographytractometry

Identifiers

PMID39605349
PMCPMC11601267

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.