Evidence map›Paper›PMID 39604636›Full record

ReviewNature plants2024

Post-genomic illumination of paclitaxel biosynthesis.

Alisdair R Fernie, Fang Liu, Youjun Zhang

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature plants, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Review
  3. Genome-Wide Analysis ofCurrent issues in molecular biology · 2026
    Article
  4. Convergence and parallelism in the evolution of plant metabolism.Journal of integrative plant biology · 2026
    Review
  5. Article
  6. Review
  7. Article
  8. Recent advances inFrontiers in plant science · 2026
    Review
  9. Review
  10. Review
  11. Article
  12. Review
  13. The Paclitaxel Biosynthesis Pathway Unlocked.Research (Washington, D.C.) · 2025
    Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Alisdair R Fernie *Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany. Fernie@mpimp-golm.mpg.de.ORCID http://orcid.org/0000-0001-9000-335X
Fang Liu *Key Laboratory of Seed Innovation, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Youjun ZhangKey Laboratory of Seed Innovation, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China. yjzhang@genetics.ac.cn.ORCID http://orcid.org/0000-0003-1052-0256

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32470416
6 · The paper itself

Abstract

Paclitaxel rapidly became one of the most effective anticancer drugs. However, the production of paclitaxel is hindered by substantial challenges, particularly considering the significant quantities of drug required and the inherently low concentration of paclitaxel and its intermediates in plants. Paclitaxel is currently produced in a so-called semi-synthesis in which baccatin III is extracted from Taxus species and chemically converted to paclitaxel. Despite the fact that many of the intermediates of paclitaxel biosynthesis are yet to be experimentally determined, a set of recent papers-facilitated by the sequencing and assembly of three Taxus genomes-has uncovered the minimal gene sets for both baccatin III and paclitaxel biosynthesis. Here we summarize the key milestones towards our understanding of paclitaxel biosynthesis and highlight recent advancements made possible by genome-level analysis of potential key genes involved. We argue that these studies will ultimately pave the way towards the elucidation of the entire paclitaxel biosynthetic pathway and facilitate the industrial production of paclitaxel via synthetic biology approaches. However, several major challenges lie ahead before we can fully tap into the amazing curative potential that taxanes provide.

Indexed as

PaclitaxelTaxusAlkaloidsBiosynthetic PathwaysGenome, PlantTaxoidsAlkaloidsbaccatin IIIPaclitaxelTaxoids

Identifiers

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.