Evidence map›Paper›PMID 39604397›Full record

ArticleNature communications2024

Population genomics of Plasmodium ovale species in sub-Saharan Africa.

Kelly Carey-Ewend, Zachary R Popkin-Hall, Alfred Simkin, Meredith Muller, Chris Hennelly, Wenqiao He, Kara A Moser, Claudia Gaither, Karamoko Niaré, Farhang Aghakanian and 15 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Towards an evolutionary baseline model ofbioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Article
  6. Metagenomic analysis reveals extreme complexity ofmedRxiv : the preprint server for health sciences · 2025
    Article
  7. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors.

Kelly Carey-EwendDepartment of Epidemiology, Gillings School of Global Public Health, University of North Carolina, Chapel Hill, NC, USA. kelly_carey-ewend@med.unc.edu.ORCID 0000-0002-3200-1644
Zachary R Popkin-HallInstitute for Global Health and Infectious Diseases, University of North Carolina, Chapel Hill, NC, USA.ORCID 0000-0002-8308-5294
Alfred SimkinDepartment of Pathology and Laboratory Medicine, Brown University, Providence, RI, USA.
Meredith MullerInstitute for Global Health and Infectious Diseases, University of North Carolina, Chapel Hill, NC, USA.
Chris HennellyInstitute for Global Health and Infectious Diseases, University of North Carolina, Chapel Hill, NC, USA.
Wenqiao HeInstitute for Global Health and Infectious Diseases, University of North Carolina, Chapel Hill, NC, USA.
Kara A MoserInstitute for Global Health and Infectious Diseases, University of North Carolina, Chapel Hill, NC, USA.
Claudia GaitherInstitute for Global Health and Infectious Diseases, University of North Carolina, Chapel Hill, NC, USA.
Karamoko NiaréDepartment of Pathology and Laboratory Medicine, Brown University, Providence, RI, USA.
Farhang AghakanianInstitute for Global Health and Infectious Diseases, University of North Carolina, Chapel Hill, NC, USA.
Sindew FelekeEthiopian Public Health Institute, Addis Ababa, Ethiopia.ORCID 0000-0002-5778-653X
Bokretsion G BrhaneEthiopian Public Health Institute, Addis Ababa, Ethiopia.
Fernandine PhanzuSANRU Asbl, Kinshasa, Democratic Republic of the Congo.
Melchior Mwandagalirwa KashamukaKinshasa School of Public Health, Kinshasa, Democratic Republic of the Congo.
Ozkan AydemirProgram in Molecular Medicine, Chan Medical School, University of Massachusetts, Worcester, MA, USA.ORCID 0000-0002-3458-6527
Colin J SutherlandLondon School of Hygiene and Tropical Medicine, London, UK.ORCID 0000-0003-1592-6407
Deus S IshengomaNational Institute for Medical Research (NIMR), Dar es Salaam, Tanzania.
Innocent M AliDepartment of Biochemistry, Faculty of Science, University of Dschang, Dschang, Cameroon.ORCID 0000-0002-1112-6376
Billy NgasalaMuhimbili University of Health and Allied Sciences, Dar es Salaam, Tanzania.
Albert KalonjiSANRU Asbl, Kinshasa, Democratic Republic of the Congo.
Antoinette TshefuKinshasa School of Public Health, Kinshasa, Democratic Republic of the Congo.
Jonathan B ParrInstitute for Global Health and Infectious Diseases, University of North Carolina, Chapel Hill, NC, USA.ORCID 0000-0002-4465-9830
Jeffrey A BaileyDepartment of Pathology and Laboratory Medicine, Brown University, Providence, RI, USA.ORCID 0000-0002-6899-8204
Jonathan J JulianoDepartment of Epidemiology, Gillings School of Global Public Health, University of North Carolina, Chapel Hill, NC, USA.ORCID 0000-0002-0591-0850
Jessica T LinInstitute for Global Health and Infectious Diseases, University of North Carolina, Chapel Hill, NC, USA.

Funding

Visualizing of Immune Responses to Toxoplasma GondiiR01AI065537 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI ROBEY, ELLEN A · 2005 to 2019
$5.1M
Training in Infectious Disease Epidemiology (TIDE)T32AI070114 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Brian W Pence · 2007 to 2026
$4.0M
RDT-undetectable Malaria in the DR Congo: Epidemiology and Development of AlternativesR01AI132547 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DINGLASAN, RHOEL DAVID RAMOS, JULIANO, JONATHAN J · 2018 to 2022
$3.6M
Relapsing malaria in Africa: mechanisms for persistence amid falciparum declineR01AI165537 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Rhoel David Ramos Dinglasan, Jonathan J Juliano · 2022 to 2026
$3.6M
Determinants of malaria transmission by submicroscopic gametocytemiaR01AI137395 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIN, JESSICA · 2018 to 2022
$3.3M
Collaborative Research: Impacts of the African Origin of Plasmodium vivax on Contemporary Parasite PopulationsR01TW010870 · FIC · UNIV OF NORTH CAROLINA CHAPEL HILL · PI JULIANO, JONATHAN J · 2017 to 2021
$2.4M
Mentoring in Translational Malaria GenomicsK24AI134990 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Jonathan J Juliano · 2018 to 2026
$1.6M
A longitudinal epidemiological and epidemiological study of malaria and its vectors in the Kinshasa provinceR01AI129812 · NIAID · KINSHASA SCHOOL OF PUBLIC HEALTH · PI TSHEFU, ANTOINETTE KITOTO · 2017 to 2021
$674k
Development of novel diagnostics for African non-falciparum malariaR21AI148579 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIN, JESSICA, PARR, JONATHAN BOYD · 2020 to 2021
$420k
Plasmodium ovale hypnozoite development and relapse: a coordinated in vivo in vitro studyR21AI152260 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ADAMS, JOHN H, LIN, JESSICA · 2021 to 2022
$418k
Population genomics and relapse epidemiology of Plasmodium ovale in sub-Saharan AfricaF30AI179111 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Kelly Carey-Ewend · 2024 to 2026
$144k
FIC NIH HHS R01 TW010870NIAID NIH HHS F30 AI179111NIAID NIH HHS K24 AI134990NIAID NIH HHS R01 AI065537NIAID NIH HHS R01 AI129812NIAID NIH HHS R01 AI132547NIAID NIH HHS R01 AI137395NIAID NIH HHS R01 AI165537NIAID NIH HHS R21 AI148579NIAID NIH HHS R21 AI152260NIAID NIH HHS T32 AI070114U.S. Department of Health & Human Services | National Institutes of Health (NIH) K24AI134990U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01AI129812U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01AI132547U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01AI65537U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01TW010870U.S. Department of Health & Human Services | National Institutes of Health (NIH) R21AI148579U.S. Department of Health & Human Services | National Institutes of Health (NIH) R21AI152260U.S. Department of Health & Human Services | National Institutes of Health (NIH) T32AI070114
6 · The paper itself

Abstract

Plasmodium ovale curtisi (Poc) and Plasmodium ovale wallikeri (Pow) are relapsing malaria parasites endemic to Africa and Asia that were previously thought to represent a single species. Amid increasing detection of ovale malaria in sub-Saharan Africa, we present a population genomic study of both species across the continent. We conducted whole-genome sequencing of 25 isolates from Central and East Africa and analyzed them alongside 20 previously published African genomes. Isolates are predominantly monoclonal (43/45), with their genetic similarity aligning with geography. Pow shows lower average nucleotide diversity (1.8×10

Indexed as

Genome, ProtozoanMalariaPlasmodium ovaleAfrica South of the SaharaGenetic VariationGenomicsHumansMerozoite Surface Protein 1MetagenomicsPhylogenyTetrahydrofolate DehydrogenaseWhole Genome SequencingMerozoite Surface Protein 1Tetrahydrofolate Dehydrogenase

Identifiers

PMID39604397
PMCPMC11603351

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.