Evidence map›Paper›PMID 39603239›Full record

ArticleMolecular cell2024

The PNUTS phosphatase complex controls transcription pause release.

Jessica R Kelley, Emilia Dimitrova, Maciej Maciuszek, Hieu T Nguyen, Aleksander T Szczurek, Amy L Hughes, Neil P Blackledge, Arminja N Kettenbach, Robert J Klose

Abstract read
In one paragraph

Article in Molecular cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. LUMINIDEPENDENS orchestrates global transcriptional repression inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jessica R KelleyDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Emilia DimitrovaDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK. Electronic address: emilia.dimitrova@bioch.ox.ac.uk.
Maciej MaciuszekDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Hieu T NguyenDepartment of Biochemistry and Cell Biology, Geisel School of Medicine at Dartmouth, Hanover, NH 03755, USA.
Aleksander T SzczurekDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Amy L HughesDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Neil P BlackledgeDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Arminja N KettenbachDepartment of Biochemistry and Cell Biology, Geisel School of Medicine at Dartmouth, Hanover, NH 03755, USA; Dartmouth Cancer Center, Lebanon, NH 03756, USA.
Robert J KloseDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK. Electronic address: rob.klose@bioch.ox.ac.uk.

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Fred W Kolling IV · 1985 to 2026
$91.3M
Phosphorylation Signaling by Phosphoprotein PhosphatasesR35GM119455 · NIGMS · DARTMOUTH COLLEGE · PI Arminja Nadine Kettenbach · 2016 to 2026
$5.1M
NCI NIH HHS P30 CA023108NIGMS NIH HHS R35 GM119455Wellcome Trust
6 · The paper itself

Abstract

Gene expression is regulated by controlling distinct steps of the transcriptional cycle, including initiation, pausing, elongation, and termination. Kinases phosphorylate RNA polymerase II (RNA Pol II) and associated factors to control transitions between these steps and to act as central gene regulatory nodes. Similarly, phosphatases that dephosphorylate these components are emerging as important regulators of transcription, although their roles remain less well understood. Here, we discover that the mouse PNUTS-PP1 phosphatase complex plays an essential role in controlling transcription pause release in addition to its previously described function in transcription termination. Transcription pause release by the PNUTS complex is essential for almost all RNA Pol II-dependent gene transcription, relies on its PP1 phosphatase subunit, and controls the phosphorylation of factors required for pause release and elongation. Together, these observations reveal an essential new role for a phosphatase complex in transcription pause release and show that the PNUTS complex is essential for RNA Pol II-dependent transcription.

Indexed as

DNA-Binding ProteinsProtein Phosphatase 1RNA Polymerase IITranscription, GeneticAnimalsHumansMiceNuclear ProteinsPhosphorylationRNA-Binding ProteinsTranscription Termination, GeneticDNA-Binding ProteinsNuclear ProteinsProtein Phosphatase 1RNA-Binding ProteinsRNA Polymerase IIpause releasePNUTSPP1 phosphataseRNA Pol IIterminationtranscription

Identifiers

PMID39603239
PMCPMC11663112

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.