ArticleAnnals of botany2025
Did crop domestication change the fitness landscape of root response to soil mechanical impedance? An in silico analysis.
Article in Annals of botany, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.
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4 citing papers in PubMed.
- Broad environmental adaptation is associated with root anatomical phenotypes in maize landraces: an in silico study.Annals of botany · 2026Article
- Science mapping of root ecology: a bibliometric review covering 2015-2024.Annals of botany · 2025Review
- RootXplorer: A computer vision-based 3D phenotyping platform for high-throughput quantification and spatio-temporal analysis of root system penetrability.Plant phenomics (Washington, D.C.) · 2025Article
- In silico analysis of the evolution of root phenotypes during maize domestication in Neolithic soils of Tehuacán.The New phytologist · 2025Article
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2 authors.
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Abstract
BACKGROUND AND
aimsRoot axes with greater penetration ability are often considered to be beneficial in hard soils. We hypothesized that maize root phenotypes with greater plasticity (meaning reduced elongation in response to mechanical impedance, i.e. a 'stop signal') have fitness advantages over phenotypes with reduced plasticity (i.e. unimpeded root elongation) in native (virgin, uncultivated) soils, by reallocating root foraging to softer, presumably wetter, soil domains, and that the value of the stop signal reduced with soil cultivation and crop domestication.
methodsWe used OpenSimRoot to simulate native and cultivated soils and evaluated maize root phenotypes with varying axial and lateral root penetration ability in water, nitrogen (N) and impedance regimes associated with Neolithic agriculture. KEY
resultsThe stop signal was advantageous in native soils but was less beneficial in cultivated, irrigated soils. Reduced root foraging in hard, dry topsoil enabled root growth in deeper domains where water is available, resulting in an improved balance of resource expenditure and acquisition. The value of the stop signal declined during crop domestication with the advent of irrigation, which increased water availability in the topsoil. Soil cultivation reduced N availability, while irrigation increased N leaching, resulting in a shift in the fitness landscape, with greater lateral root length (i.e. reduced plasticity) being advantageous by colocalizing root foraging with N availability. The importance of the stop signal is evident in modern high-input systems in which drought is a limiting factor.
conclusionsOur results support the hypotheses that the reduction of lateral root growth by mechanical impedance is adaptive in native soil, but became less adaptive with soil cultivation and irrigation associated with Neolithic agriculture.
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