Evidence map›Paper›PMID 39602539›Full record

ArticleScience advances2024

Genomic heterogeneity and ploidy identify patients with intrinsic resistance to PD-1 blockade in metastatic melanoma.

Giuseppe Tarantino, Cora A Ricker, Annette Wang, William Ge, Tyler J Aprati, Amy Y Huang, Shariq Madha, Jiajia Chen, Yingxiao Shi, Marc Glettig and 29 more

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Overcoming Resistance Mechanisms to Melanoma Immunotherapy.American journal of clinical dermatology · 2025
    Review
  7. Stratified analysis identifies HIF-2bioRxiv : the preprint server for biology · 2024
    Article
  8. Review
  9. Whole-genome doubling in tissues and tumors.Trends in genetics : TIG · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

39 authors.

Giuseppe TarantinoDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.ORCID 0000-0002-6078-6856
Cora A RickerDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.ORCID 0000-0003-1202-5603
Annette WangHarvard Medical School, Boston, MA, USA.
William GeHarvard Medical School, Boston, MA, USA.ORCID 0000-0002-2278-8201
Tyler J ApratiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.ORCID 0000-0003-1323-9697
Amy Y HuangDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.ORCID 0000-0002-6646-6503
Shariq MadhaWorcester Polytechnic Institute, Worcester, MA, USA.ORCID 0000-0001-6022-6560
Jiajia ChenDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.
Yingxiao ShiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.
Marc GlettigDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.ORCID 0000-0002-2512-7740
Catherine H FengDepartment of Thoracic/Head and Neck Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0002-7413-9748
Dennie T FrederickBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Samuel FreemanBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0001-8285-0057
Marta M HolovatskaDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.
Michael P ManosDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.ORCID 0000-0003-0841-207X
Lisa ZimmerDepartment of Dermatology, University HospitalEssen, Essen, Germany.ORCID 0000-0002-3680-3521
Alexander RöschDepartment of Dermatology, University HospitalEssen, Essen, Germany.
Anne ZarembaDepartment of Dermatology, University HospitalEssen, Essen, Germany.
Elisabeth LivingstoneDepartment of Dermatology, University HospitalEssen, Essen, Germany.
Jacob C JamesonInterfaculty Initiative in Health Policy, Harvard University, Cambridge, MA, USA.ORCID 0009-0000-6980-2982
Soroush SaghafianHarvard Kennedy School, Harvard University, Cambridge, MA, USA.ORCID 0000-0002-9781-6561
Andrew LeeDepartment of Surgery and Cancer Immunogenomics Research Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Karena ZhaoDepartment of Surgery and Cancer Immunogenomics Research Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Luc G T MorrisDepartment of Surgery and Cancer Immunogenomics Research Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-4417-2280
Brendan ReardonDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.ORCID 0000-0002-1716-5720
Jihye ParkDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.
Haitham A ElmarakebyDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.
Bastian SchillingDepartment of Dermatology, University HospitalEssen, Essen, Germany.ORCID 0000-0001-8859-4103
Anita Giobbie-HurderDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.ORCID 0000-0003-2496-7737
Natalie I VokesDepartment of Thoracic/Head and Neck Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0002-3766-5335
Elizabeth I BuchbinderDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.
Keith T FlahertyMassachusetts General Hospital, Boston, MA, USA.ORCID 0000-0002-3402-0478
Rizwan HaqDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.
Catherine J WuDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.ORCID 0000-0002-3348-5054
Genevieve M BolandMassachusetts General Hospital, Boston, MA, USA.ORCID 0000-0002-7522-6173
F Stephen HodiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.ORCID 0000-0001-6825-091X
Eliezer M Van AllenDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.ORCID 0000-0002-0201-4444
Dirk SchadendorfDepartment of Dermatology, University HospitalEssen, Essen, Germany.ORCID 0000-0003-3524-7858
David LiuDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston MA, USA.ORCID 0000-0003-0346-5033

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Molecular origins and evolution to treatment resistance in genitourinary cancersR50CA265182 · NCI · DANA-FARBER CANCER INST · PI Jihye Park · 2022 to 2026
$1.7M
Dissecting Therapeutic Resistance and Progression in Metastatic Melanoma Through Clinical Computational OncologyK08CA234458 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI LIU, DAVID · 2018 to 2022
$1.2M
Training Program in Comparative Effectiveness Research for Suicide PreventionT32MH125815 · NIMH · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI MIGUEL HERNAN, MATTHEW K NOCK · 2022 to 2026
$1.2M
NCI NIH HHS K08 CA234458NCI NIH HHS P30 CA008748NCI NIH HHS R50 CA265182NIMH NIH HHS T32 MH125815
6 · The paper itself

Abstract

The introduction of immune checkpoint blockade (ICB) has markedly improved outcomes for advanced melanoma. However, many patients develop resistance through unknown mechanisms. While combination ICB has improved response rate and progression-free survival, it substantially increases toxicity. Biomarkers to distinguish patients who would benefit from combination therapy versus aPD-1 remain elusive. We analyzed whole-exome sequencing of pretreatment tumors from four cohorts (

Indexed as

Drug Resistance, NeoplasmImmune Checkpoint InhibitorsMelanomaPloidiesProgrammed Cell Death 1 ReceptorBiomarkers, TumorExome SequencingFemaleGenetic HeterogeneityGenomicsHumansMaleMiddle AgedNeoplasm MetastasisBiomarkers, TumorImmune Checkpoint InhibitorsPDCD1 protein, humanProgrammed Cell Death 1 Receptor

Identifiers

PMID39602539
PMCPMC11601251

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.