Evidence map›Paper›PMID 39599817›Full record

ReviewViruses2024

Viral RNA Interactome: The Ultimate Researcher's Guide to RNA-Protein Interactions.

Wesley A Hanson, Gabriel A Romero Agosto, Silvi Rouskin

Abstract readReview
In one paragraph

Review in Viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Wesley A HansonDepartment of Microbiology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA.
Gabriel A Romero AgostoDepartment of Microbiology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA.
Silvi RouskinDepartment of Microbiology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA.

Funding

Constructing the nest - understanding the mechanisms of nidoviridae RNA genomes transcription and recombinationDP2AI175475 · NIAID · HARVARD MEDICAL SCHOOL · PI ROUSKIN, SILVIA · 2022 to 2022
$1.5M
NIAID NIH HHS DP2 AI175475
6 · The paper itself

Abstract

RNA molecules in the cell are bound by a multitude of RNA-binding proteins (RBPs) with a variety of regulatory consequences. Often, interactions with these RNA-binding proteins are facilitated by the complex secondary and tertiary structures of RNA molecules. Viral RNAs especially are known to be heavily structured and interact with many RBPs, with roles including genome packaging, immune evasion, enhancing replication and transcription, and increasing translation efficiency. As such, the RNA-protein interactome represents a critical facet of the viral replication cycle. Characterization of these interactions is necessary for the development of novel therapeutics targeted at the disruption of essential replication cycle events. In this review, we aim to summarize the various roles of RNA structures in shaping the RNA-protein interactome, the regulatory roles of these interactions, as well as up-to-date methods developed for the characterization of the interactome and directions for novel, RNA-directed therapeutics.

Indexed as

RNA-Binding ProteinsRNA, ViralVirus ReplicationAnimalsHumansNucleic Acid ConformationProtein BindingRNA-Binding ProteinsRNA, ViralRNA-binding protein (RBP)RNA chemical probingRNA-protein interactomeRNA secondary structurevirus-host interactome

Identifiers

PMID39599817
PMCPMC11599142

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.