Evidence map›Paper›PMID 39597619›Full record

ArticleMicroorganisms2024

One Year of Wastewater Surveillance in South Africa Supporting COVID-19 Clinical Findings Across Two Waves of Infection.

Renée Street, Angela Mathee, Tarylee Reddy, Nomfundo T Mahlangeni, Noluxabiso Mangwana, Sizwe Nkambule, Candice Webster, Stephanie Dias, Jyoti Rajan Sharma, Pritika Ramharack and 7 more

Abstract read
In one paragraph

Article in Microorganisms, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Environmental surveillance of pathogens in Africa.Applied and environmental microbiology · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Renée StreetEnvironment & Health Research Unit, South African Medical Research Council (SAMRC), Cape Town 7505, South Africa.
Angela MatheeEnvironmental Health Department, Faculty of Health Sciences, University of Johannesburg, Johannesburg 2028, South Africa.ORCID 0000-0002-0060-829X
Tarylee ReddyBiostatistics Unit, South African Medical Research Council (SAMRC), Durban 4091, South Africa.
Nomfundo T MahlangeniEnvironment & Health Research Unit, South African Medical Research Council (SAMRC), Cape Town 7505, South Africa.ORCID 0000-0001-8655-2794
Noluxabiso MangwanaBiomedical Research and Innovation Platform (BRIP), South African Medical Research Council (SAMRC), Tygerberg 7505, South Africa.
Sizwe NkambuleEnvironment & Health Research Unit, South African Medical Research Council (SAMRC), Cape Town 7505, South Africa.
Candice WebsterEnvironment & Health Research Unit, South African Medical Research Council (SAMRC), Cape Town 7505, South Africa.ORCID 0000-0001-7618-1459
Stephanie DiasBiomedical Research and Innovation Platform (BRIP), South African Medical Research Council (SAMRC), Tygerberg 7505, South Africa.ORCID 0000-0003-3008-4279
Jyoti Rajan SharmaBiomedical Research and Innovation Platform (BRIP), South African Medical Research Council (SAMRC), Tygerberg 7505, South Africa.ORCID 0000-0003-0170-7342
Pritika RamharackBiomedical Research and Innovation Platform (BRIP), South African Medical Research Council (SAMRC), Tygerberg 7505, South Africa.ORCID 0000-0001-5850-6782
Johan LouwBiomedical Research and Innovation Platform (BRIP), South African Medical Research Council (SAMRC), Tygerberg 7505, South Africa.
Swastika Surujlal-NaickerScientific Services, Water and Sanitation Department, City of Cape Town Metropolitan Municipality, Cape Town 8000, South Africa.
Natacha BerkowitzCommunity Service and Health, City Health, City of Cape Town, Hertzog Boulevard, Cape Town 8000, South Africa.ORCID 0000-0002-8797-5593
Mongezi MdhluliChief Research Operations Office, South African Medical Research Council, Tygerberg 7050, South Africa.
Glenda GrayOffice of the President, South African Medical Research Council, Tygerberg 7050, South Africa.
Christo MullerBiomedical Research and Innovation Platform (BRIP), South African Medical Research Council (SAMRC), Tygerberg 7505, South Africa.ORCID 0000-0001-6821-2120
Rabia JohnsonBiomedical Research and Innovation Platform (BRIP), South African Medical Research Council (SAMRC), Tygerberg 7505, South Africa.ORCID 0000-0002-6328-0789

Funding

national research foundation 138011south african medical research council 40118
6 · The paper itself

Abstract

Wastewater-based epidemiology (WBE) has been an important tool for the detection of COVID-19 outbreaks. The retrospective analysis of COVID-19 data is vital to understand the spread and impact of the virus as well as to inform future planning and response efforts. In this study, we evaluated the SARS-CoV-2 RNA levels in wastewater from 21 wastewater treatment plants (WWTPs) in the City of Cape Town (South Africa) over a period of 12 months and compared the (inactive) SARS-CoV-2 viral RNA in wastewater between wave 2 (November 2020 to January 2021) and wave 3 (June 2021 to September 2021). The SARS-CoV-2 RNA expression was quantified in wastewater using quantitative real-time PCR (qRT-PCR) by targeting the nucleocapsid (N) gene, and the resultant signal was normalized to the WWTP design capacity and catchment size. Our findings show that the maximum SARS-CoV-2 RNA signal was significantly higher in wave 3 than in wave 2 (

Indexed as

COVID-19environmental epidemiologySARS-CoV-2South Africaviral RNAwastewater

Identifiers

PMID39597619
PMCPMC11596097

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.