ArticleMicroorganisms2024
Comparative Genomics Reveal Distinct Environment Preference and Functional Adaptation Among Lineages of Gemmatimonadota.
Article in Microorganisms, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.
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Who cites it
5 citing papers in PubMed.
- Rhizosphere Ion Composition Shapes Microbial Communities and Is Associated with Plant Growth Variation in Saline-Alkali Soils.Microorganisms · 2026Article
- Oxygen Minimum Zone and Organic Carbon Structure Benthic Prokaryotic Communities and Metabolism in Warm Deep-Red Sea Sediments.Microorganisms · 2026Article
- Phylogenetic Distribution and Predicted Functional and Ecological Shifts in Soil Bacterial Communities Along a Soda Saline-Alkali Wetland Degradation Gradient.Life (Basel, Switzerland) · 2026Article
- Mechanisms ofFrontiers in plant science · 2026Article
- Permanent crop cover as a strategy for drought-resistant viticulture: insights on how rhizosphere metagenomics influences leaf-level -omics for an enhanced overall plant response.Frontiers in plant science · 2025Article
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Authors and funding
6 authors.
Funding
Abstract
Bacteria in the phylum Gemmatimonadota are globally distributed and abundant in microbial communities of various environments, playing an important role in driving biogeochemical cycling on Earth. Although high diversities in taxonomic composition and metabolic capabilities have been reported, little is known about the environmental preferences and associated functional features that facilitate adaptation among different Gemmatimonadota lineages. This study systematically analyzed the relationships between the environments, taxonomy, and functions of Gemmatimonadota lineages, by using a comparative genomics approach based on 1356 Gemmatimonadota genomes (213 high-quality and non-redundant genomes) available in a public database (NCBI). The taxonomic analysis showed that the 99.5% of the genomes belong to the class Gemmatimonadetes, and the rest of the genomes belong to the class Glassbacteria. Functional profiling revealed clear environmental preference among different lineages of Gemmatimonadota, and a marine group and two non-marine groups were identified and tested to be significantly different in functional composition. Further annotation and statistical comparison revealed a large number of functional genes (e.g.,
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