Evidence map›Paper›PMID 39596708›Full record

ArticleAntibiotics (Basel, Switzerland)2024

Microbiome and Resistome Studies of the Lithuanian Baltic Sea Coast and the Curonian Lagoon Waters and Sediments.

Greta Gyraitė, Marija Kataržytė, Rafael Picazo Espinosa, Greta Kalvaitienė, Eglė Lastauskienė

Abstract read
In one paragraph

Article in Antibiotics (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Greta GyraitėBioscience Institute, Life Science Center, Vilnius University, 10257 Vilnius, Lithuania.ORCID 0000-0002-7079-7997
Marija KataržytėMarine Research Institute, Klaipeda University, 92295 Klaipėda, Lithuania.ORCID 0000-0001-7751-3187
Rafael Picazo EspinosaMarine Research Institute, Klaipeda University, 92295 Klaipėda, Lithuania.ORCID 0009-0002-4625-2142
Greta KalvaitienėMarine Research Institute, Klaipeda University, 92295 Klaipėda, Lithuania.
Eglė LastauskienėBioscience Institute, Life Science Center, Vilnius University, 10257 Vilnius, Lithuania.ORCID 0000-0001-6390-9033

Funding

Lietuvos Mokslo Taryba S-PD-22-80
6 · The paper itself

Abstract

backgroundthe widespread use of antibiotics in human and veterinary medicine has contributed to the global challenge of antimicrobial resistance, posing significant environmental and public health risks.

objectivesthis study aimed to examine the microbiome and resistome dynamics across a salinity gradient, analyzing water and sediment samples from the Baltic Sea coast and the Curonian Lagoon between 2017 and 2023.

methodsthe composition of the water and sediment bacterial community was determined by Full-Length Amplicon Metagenomics Sequencing, while ARG detection and quantification were performed using the SmartChipTM Real-Time PCR system.

resultsthe observed differences in bacterial community composition between the Baltic Sea coast and the Curonian Lagoon were driven by variations in salinity and chlorophyll a (chl a) concentration. The genera associated with infectious potential were observed in higher abundances in sediment than in water samples. Over 300 genes encoding antibiotic resistance (ARGs), such as aminoglycosides, beta-lactams, and multidrug resistance genes, were identified. Of particular interest were those ARGs that have previously been detected in pathogens and those currently classified as a potential future threat. Furthermore, our findings reveal a higher abundance and a distinct profile of ARGs in sediment samples from the lagoon compared to water.

conclusionsthese results suggest that transitional waters such as lagoons may serve as reservoirs for ARGs, and might be influenced by anthropogenic pressures and natural processes such as salinity fluctuation and nutrient cycling.

Indexed as

antibiotic resistance genesbathing watersmicrobial community

Identifiers

PMID39596708
PMCPMC11591088

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.