Evidence map›Paper›PMID 39596677›Full record

ArticleGenes2024

Runs of Homozygosity Islands in Autochthonous Spanish Cattle Breeds.

C Hervás-Rivero, N Mejuto-Vázquez, D López-Carbonell, J Altarriba, C Diaz, A Molina, R Rodríguez-Bermúdez, J Piedrafita, J A Baro, L Varona

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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  7. Genome-wide insights into selection signatures for transcription factor binding sites in cattle ROH regions.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

C Hervás-RiveroInstituto Agroalimentario de Aragón (IA2), Departamento de Anatomía, Embriología y Genética, Facultad de Veterinaria, Universidad de Zaragoza, C. Miguel Servet, 177, 50013 Zaragoza, Spain.
N Mejuto-VázquezDepartamento de Anatomía, Producción Animal y Ciencias Clínicas Veterinarias, Facultad de Veterinaria, Universidad de Santiago de Compostela, Av. Carvallo Calero, 27002 Lugo, Spain.
D López-CarbonellInstituto Agroalimentario de Aragón (IA2), Departamento de Anatomía, Embriología y Genética, Facultad de Veterinaria, Universidad de Zaragoza, C. Miguel Servet, 177, 50013 Zaragoza, Spain.ORCID 0000-0003-0964-9212
J AltarribaInstituto Agroalimentario de Aragón (IA2), Departamento de Anatomía, Embriología y Genética, Facultad de Veterinaria, Universidad de Zaragoza, C. Miguel Servet, 177, 50013 Zaragoza, Spain.
C DiazDepartamento de Mejora Genética Animal, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA-CSIC), 28040 Madrid, Spain.ORCID 0000-0001-8483-9062
A MolinaDepartamento de Genética, Facultad de Veterinaria, Universidad de Córdoba, 14071 Córdoba, Spain.ORCID 0000-0002-9566-6600
R Rodríguez-BermúdezDepartamento de Anatomía, Producción Animal y Ciencias Clínicas Veterinarias, Facultad de Veterinaria, Universidad de Santiago de Compostela, Av. Carvallo Calero, 27002 Lugo, Spain.ORCID 0000-0002-3372-6575
J PiedrafitaDepartamento de Ciencia Animal y de los Alimentos, Facultat de Veterinaria, Universitat Autònoma de Barcelona, Bellaterra, 08193 Barcelona, Spain.
J A BaroDepartamento de Ciencias Agroforestales, ETS de Ingenierías Agrarias, Universidad de Valladolid, 34004 Palencia, Spain.ORCID 0000-0002-3255-2585
L VaronaInstituto Agroalimentario de Aragón (IA2), Departamento de Anatomía, Embriología y Genética, Facultad de Veterinaria, Universidad de Zaragoza, C. Miguel Servet, 177, 50013 Zaragoza, Spain.ORCID 0000-0001-6256-5478

Funding

Comisión Interministerial de Ciencia y Tecnología AGL 2010-15903
6 · The paper itself

Abstract

BACKGROUND/

objectivesUnderstanding the genetic architecture of autochthonous European cattle breeds is important for developing effective conservation strategies and sustainable breeding programs. Spanish beef cattle, which trace their origins to ancient migrations from the Near East with later admixture from African populations, exhibit a rich genetic diversity shaped by environmental adaptation and selective breeding. Runs of Homozygosity (ROH) are extended stretches of identical genetic material inherited from both parents. They serve as indicators of inbreeding and selection signatures within populations. ROH islands, or regions of the genome where ROH segments are highly concentrated across individuals within a breed, indicate genomic regions under selective pressure.

methodsThis study explores the distribution of ROH islands across seven Spanish beef cattle breeds (Asturiana de los Valles, Avileña-Negra Ibérica, Bruna dels Pirineus, Morucha, Retinta, Pirenaica, and Rubia Gallega). By analyzing high-density SNP data, we characterized ROH patterns and identified genomic regions with high levels of homozygosity, which may indicate selection pressures or common ancestry.

resultsOur findings revealed breed-specific ROH patterns as well as shared ROH islands, underscoring genetic relationships and differentiation among the breeds. Notably, Morucha displayed the highest number of ROH, while Asturiana de los Valles had the fewest. F

conclusionsThis study offers valuable insights for breeding strategies and conservation efforts, highlighting the genetic diversity and historical background of Spanish cattle breeds.

Indexed as

HomozygotePolymorphism, Single NucleotideAnimalsBreedingCattleGenetic VariationGenomeInbreedingSelection, GeneticSpainautochthonous cattleROH islandsruns of homozygosity (ROH)selection signatures

Identifiers

PMID39596677
PMCPMC11593383

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.