Evidence map›Paper›PMID 39596673›Full record

ArticleGenes2024

Whole-Genome Sequence and Characterization of

Guan Lin, Juntao Gao, Junxian Zou, Denghui Li, Yu Cui, Yong Liu, Lingxue Kong, Shiwang Liu

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Guan LinSchool of Biological & Chemical Engineering, Zhejiang University of Science & Technology, Hangzhou 310023, China.
Juntao GaoSchool of Biological & Chemical Engineering, Zhejiang University of Science & Technology, Hangzhou 310023, China.ORCID 0009-0003-7318-5851
Junxian ZouSchool of Biological & Chemical Engineering, Zhejiang University of Science & Technology, Hangzhou 310023, China.
Denghui LiSchool of Biological & Chemical Engineering, Zhejiang University of Science & Technology, Hangzhou 310023, China.
Yu CuiSchool of Biological & Chemical Engineering, Zhejiang University of Science & Technology, Hangzhou 310023, China.
Yong LiuSchool of Biological & Chemical Engineering, Zhejiang University of Science & Technology, Hangzhou 310023, China.ORCID 0000-0003-1289-7196
Lingxue KongInstitute for Frontier Materials, Deakin University, Geelong, VIC 3216, Australia.ORCID 0000-0001-6219-3897
Shiwang LiuSchool of Biological & Chemical Engineering, Zhejiang University of Science & Technology, Hangzhou 310023, China.

Funding

China Scholarship Council No. 202107570001
6 · The paper itself

Abstract

BACKGROUND/

objectivesBacterial wilt disease is a soil-borne disease caused by

methodsIn this work, strain MLY102 was isolated and further identified as

resultsMLY102 had a pinkish-red color in the center of the colony surrounded by a milky-white liquid with fluidity on TTC medium. The biochemical results revealed that MLY102 can utilize carbon sources, including D-glucose (dGLU), cane sugar (SAC) and D-trehalose dihydrate (dTRE). Genome sequencing through the DNBSEQ and PacBio platforms revealed a genome size of 5.72 Mb with a G+C content of 67.59%. The genome consists of a circular chromosome and a circular giant plasmid with 5283 protein-coding genes. A comparison of the genomes revealed that MLY102 is closely related to GMI1000 and CMR15 but has 498 special genes and 13 homologous genes in the species-specific gene family, indicating a high degree of genomic uniqueness.

conclusionsThe unique characteristics and genomic data of MLY102 can provide important reference values for the prevention and control of bacterial wilt disease.

Indexed as

Genome, BacterialNicotianaPlant DiseasesRalstonia solanacearumWhole Genome SequencingPhylogenycomparisongenomeisolationRalstonia solanacearum

Identifiers

PMID39596673
PMCPMC11593729

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.