Evidence map›Paper›PMID 39596560›Full record

ArticleGenes2024

Genomic Analysis of the Giant Red Shrimp (

Sandra Heras, Alba Abras, Aleix Palahí, Jose-Luis García-Marín, María Inés Roldán

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sandra HerasLaboratori d'Ictiologia Genètica, Universitat de Girona, ES-17003 Girona, Spain.ORCID 0000-0002-9142-8760
Alba AbrasLaboratori d'Ictiologia Genètica, Universitat de Girona, ES-17003 Girona, Spain.ORCID 0000-0003-2002-1186
Aleix PalahíLaboratori d'Ictiologia Genètica, Universitat de Girona, ES-17003 Girona, Spain.
Jose-Luis García-MarínLaboratori d'Ictiologia Genètica, Universitat de Girona, ES-17003 Girona, Spain.ORCID 0000-0001-9976-5211
María Inés RoldánLaboratori d'Ictiologia Genètica, Universitat de Girona, ES-17003 Girona, Spain.ORCID 0000-0003-3936-3522

Funding

Spanish Ministerio de Ciencia e Innovación AGL2009-09228Spanish Ministerio de Educación y Ciencia CTM2006-00785
6 · The paper itself

Abstract

BACKGROUND/

objectivesThe giant red shrimp,

methodsNext-generation sequencing based on 454 pyrosequencing revealed 58 candidate microsatellite loci for

resultsAs a result, 10 polymorphic loci were identified, which did not present linkage disequilibrium and showed a range of alleles per locus and an observed and expected heterozygosity of 2-10, 0.0667-0.5567, and 0.0661-0.8511, respectively. Nine out of these loci were under Hardy-Weinberg equilibrium and showed a combined exclusion probability of 0.9202 and 0.9968 in parentage and identity analysis, respectively.

conclusionsThis set of loci will provide a strong set of tools to (i) perform parentage studies and (ii) examine connectivity patterns (horizontal and vertical), including examining the population structure of this species at a variety of geographical scales and, particularly, between exploited populations in shallow waters and deeper unexploited populations.

Indexed as

High-Throughput Nucleotide SequencingMicrosatellite RepeatsAnimalsGenetics, PopulationGenomicsLinkage DisequilibriumPenaeidaePolymorphism, GeneticAristaeomorpha foliaceagiant red shrimpmicrosatellite locinext-generation sequencingparentage studiespopulation genetics

Identifiers

PMID39596560
PMCPMC11593433

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.