Evidence map›Paper›PMID 39593912›Full record

ArticleEntropy (Basel, Switzerland)2024

Efficient Search Algorithms for Identifying Synergistic Associations in High-Dimensional Datasets.

Cillian Hourican, Jie Li, Pashupati P Mishra, Terho Lehtimäki, Binisha H Mishra, Mika Kähönen, Olli T Raitakari, Reijo Laaksonen, Liisa Keltikangas-Järvinen, Markus Juonala and 1 more

Abstract read
In one paragraph

Article in Entropy (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Cillian HouricanComputational Science Lab, Institute of Informatics, University of Amsterdam, 1012 WP Amsterdam, The Netherlands.ORCID 0009-0002-3161-0736
Jie LiComputational Science Lab, Institute of Informatics, University of Amsterdam, 1012 WP Amsterdam, The Netherlands.
Pashupati P MishraDepartment of Clinical Chemistry, Faculty of Medicine and Health Technology, Tampere University, 33100 Tampere, Finland.ORCID 0000-0001-5177-3431
Terho LehtimäkiDepartment of Clinical Chemistry, Faculty of Medicine and Health Technology, Tampere University, 33100 Tampere, Finland.
Binisha H MishraDepartment of Clinical Chemistry, Faculty of Medicine and Health Technology, Tampere University, 33100 Tampere, Finland.
Mika KähönenFinnish Cardiovascular Research Center Tampere, Faculty of Medicine and Health Technology, Tampere University, 33100 Tampere, Finland.
Olli T RaitakariResearch Centre of Applied and Preventive Cardiovascular Medicine, University of Turku, 20014 Turku, Finland.
Reijo LaaksonenFinnish Cardiovascular Research Center Tampere, Faculty of Medicine and Health Technology, Tampere University, 33100 Tampere, Finland.
Liisa Keltikangas-JärvinenDepartment of Psychology and Logopedics, University of Helsinki, 00100 Helsinki, Finland.ORCID 0000-0002-7977-3852
Markus JuonalaDivision of Medicine, Turku University Hospital, 20520 Turku, Finland.ORCID 0000-0001-9498-364X
Rick QuaxComputational Science Lab, Institute of Informatics, University of Amsterdam, 1012 WP Amsterdam, The Netherlands.ORCID 0000-0002-0299-0074

Funding

Academy of Finland 356405, 322098, 286284, 134309 (Eye), 126925, 121584, 124282, 129378 674 (Salve), 117797 (Gendi), and 141071 (Skidi)Netherlands Organisation for Health Research and Development 09120012010063ToAition project, which has received funding from the European Union's Horizon 2020 research and innovation programme 848146
6 · The paper itself

Abstract

In recent years, there has been a notably increased interest in the study of multivariate interactions and emergent higher-order dependencies. This is particularly evident in the context of identifying synergistic sets, which are defined as combinations of elements whose joint interactions result in the emergence of information that is not present in any individual subset of those elements. The scalability of frameworks such as partial information decomposition (PID) and those based on multivariate extensions of mutual information, such as O-information, is limited by combinational explosion in the number of sets that must be assessed. In order to address these challenges, we propose a novel approach that utilises stochastic search strategies in order to identify synergistic triplets within datasets. Furthermore, the methodology is extensible to larger sets and various synergy measures. By employing stochastic search, our approach circumvents the constraints of exhaustive enumeration, offering a scalable and efficient means to uncover intricate dependencies. The flexibility of our method is illustrated through its application to two epidemiological datasets: The Young Finns Study and the UK Biobank Nuclear Magnetic Resonance (NMR) data. Additionally, we present a heuristic for reducing the number of synergistic sets to analyse in large datasets by excluding sets with overlapping information. We also illustrate the risks of performing a feature selection before assessing synergistic information in the system.

Indexed as

O-informationparticle swarm optimizationsimulated annealingstochastic searchsynergy

Identifiers

PMID39593912
PMCPMC11592859

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.